Protein

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UniProt accession
A0A075KJF3 [UniProt]
Protein name
Collagen repeats protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MRKLYLANGNSKFKFSDTTTKIILTAFDNGIPVELTSNSKVRVKNDSGYLLDVSASIMNGQATITSGQLAQLPVGSYLLELWDTVSGGTAIYPSDGFLELQINENVIGLSGNLISSITVDDFIEQFSGLSQQLKKQVSDAVANGLKGDKGDDGLSAYQVAVINGYKGSQTEWLASLVGAKGDKGDKGDPGKDFRIVKTFPSVAEMRGDGFADGDFTMVASDVNDPDDGKLYVWNGSNFTFVADLSGSQGIKGDKGDKGDKGDKGDKGDQGLSAYQVAVSAGFHGGVNEWLASLVGQKGDKGDKGERGDAGIRVITQAEYDTLTDKSGVYFIEG
Physico‐chemical
properties
protein length:333 AA
molecular weight: 35182,58450 Da
isoelectric point:4,61455
aromaticity:0,08408
hydropathy:-0,33483

Domains

Domains [InterPro]
DC_2121
ATT
4–247
DC_2121
IPR050149
Unmapped
144–310
IPR050149
DC_2121
ATT
216–332
DC_2121
A0A075KJF3
1 333
Architecture
ATT
ATT 4-332 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Ld17
[NCBI] 		1500733 Uroviricota > Caudoviricetes > Cequinquevirus >
Host Lactobacillus delbrueckii
[NCBI] 		1584 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIF54394.1 [NCBI]
Genbank nucleotide accession
KJ564037 [NCBI]
CDS location
range 16209 -> 17210
strand +
CDS
ATGAGAAAACTATATCTTGCCAACGGAAATAGCAAGTTCAAATTTTCAGATACTACAACAAAAATCATTTTGACTGCATTTGATAATGGTATCCCAGTAGAACTAACATCAAATTCAAAAGTCAGAGTCAAGAATGATTCCGGATATTTGCTTGATGTAAGTGCCAGCATCATGAACGGCCAAGCTACCATTACTAGCGGACAGCTGGCTCAGTTACCAGTCGGAAGCTATCTGCTTGAACTGTGGGATACTGTAAGTGGAGGAACTGCTATCTATCCTAGTGATGGCTTCTTGGAACTTCAAATTAATGAGAACGTCATCGGCCTTTCTGGCAACCTTATCAGTAGTATCACGGTTGATGACTTCATCGAGCAGTTCAGCGGTCTCAGTCAGCAACTCAAAAAACAAGTTTCTGATGCTGTAGCAAATGGCTTGAAGGGAGATAAGGGTGATGACGGACTATCAGCCTATCAAGTAGCAGTTATTAACGGCTATAAAGGTTCACAAACTGAGTGGCTTGCTTCTCTGGTGGGAGCTAAAGGCGACAAGGGCGATAAAGGTGATCCGGGGAAAGATTTTCGAATCGTGAAGACGTTCCCGTCAGTTGCTGAAATGCGTGGCGATGGCTTCGCAGATGGCGATTTTACCATGGTTGCCAGTGACGTCAACGATCCAGATGATGGCAAACTCTACGTGTGGAATGGTAGCAACTTTACCTTTGTAGCCGATTTGAGCGGATCTCAAGGTATCAAAGGCGACAAGGGCGATAAAGGTGATAAAGGCGACAAAGGCGATAAAGGCGATCAAGGGCTGTCTGCTTATCAAGTTGCCGTGAGCGCCGGCTTCCATGGCGGTGTAAATGAGTGGCTCGCCTCTCTAGTTGGTCAAAAAGGTGACAAGGGCGATAAAGGTGAAAGAGGTGATGCCGGCATCCGTGTCATTACTCAAGCAGAGTATGATACGCTAACTGACAAGTCCGGTGTCTACTTCATTGAGGGGTGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
184c71dc9d3e60c62d8b396e1a55dbe8940be69655cbbd4ad0ca886cbfcaf734
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8369
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 25002431 PubMed