Protein

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Genbank accession
XKC24958.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MIKVIYKKDALSEEKTIEQAQTIGQWLTSKYEHMPEHVRIFHTTSNMDHAEISFANEVTPKNAYELKQLDFLPGTFIVVENPKWVAAIVSIVISIAIAFLMPTPSIAQTTQNTNQSSSANNELSNRENKIRVNGRIADNYGAGWNTPDLIAVPYKVYENNVEVEHVVGCIGRGHYKINGAYDGETNIVDIAGASVEVYRPGVDIVSGEPYFSLGTEITTPPLTVQHQTSVNGQVLRPADTQSLEGANYLHFAYPNEILRASANNTDLTTKFVSNDRVEITNASFTYNGQTYDLNGTYSVLSVADDRMALSNPAAVNPNWLKLKELSNQQTGALSPKLSSIGEKWIGPFILDNVERSRVLCNFVATNGLYTVSSGGNQGAVNVTIEVEVTPVNESGAAIGNPMLKQIILKGSAKSRQTVGATLDMVTFQGRCSVRARRLTPTPAVTTVVDDVKWQALYGAYPLQSTTYEHETVFRARTYATTGALSVKSRKINFDLQRMLPTYKNGAMTTELFPTSSFADALVSMALDDKIGRRTIDEIDLENIYRTYNNVVDYFGTPLAAEFCTTIDDTNLSFEELVTNLCDAVFCTAYRQNNKLKLYFERPTDNSVMLFNFRNIIPDSYKHDLTFGVMDDYDGLIYEYTDPTDDSRINIYLPDKGAKNPKEVKSVGVRNKWQAHFNAYRIWNKLRFQRKSITFDAAPESELLVLRDRIAVADYRNGIHQSGEVVQQEGLILTLSHDVDFIAGKSYVIYLQMGDGTVDLIPVTAGSAKNKVVLGRLPNGALKLSPDDFVNTIYTVVNDDTKGSLPYLVAKREPADQFSNTITAINYDERYYLNDKDFIDVPVDDSPIYIRYDQLDINLARLYQMQRGDLPTTGEISFVVEAGALVSSSSSYRPETRFVYKFDYKSSPAKREYIVPAASELPAIDTGEFPPDLVVNLTIKGAVVGRGGDGGLPHLAYGDWEKDSDFNFTKTRRDGFQGAPGLLNRHSKLNLIIDGGTLARGGSGGGATPSGIYTGSSYGVQGIPGGAGAPFGRVMTGQPISNDSQDYRLYLESYLLVMKITDAEASVPGKGYRTQNDRYGSPLSGDGGNWGERGTKSTNDGTWNWQYHGTTEGQPGPGGPAIVGVAPLTTQLINGGKILQTL
Physico‐chemical
properties
protein length:1141 AA
molecular weight: 125542,34320 Da
isoelectric point:5,33607
aromaticity:0,09378
hydropathy:-0,32174

Domains

Domains [InterPro]
DC_0118
STR
1–683
DC_0118 DC_0808
NF040662
Unmapped
353–831
NF040662 DC_1679
XKC24958.1
1 1141
Architecture
STR
RBD
STR
STR 1-683 | RBD 699-861 | STR 862-1044 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKC24958.1
1 1141
Domain Start End Length (AA) Confidence
N-terminal 1 236 236 0,9230
Central domain 237 435 200 0,6885
C-terminal 436 1141 705 0,0910
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-236
Central
237-435
C-terminal
436-1141

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage phi5013-M1
[NCBI] 		3374944 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC24958.1 [NCBI]
Genbank nucleotide accession
PQ432284 [NCBI]
CDS location
range 12597 -> 16022
strand +
CDS
ATGATTAAAGTTATTTATAAAAAAGACGCTTTGTCTGAAGAAAAGACAATTGAGCAGGCTCAAACCATTGGGCAATGGCTCACTTCAAAATATGAACATATGCCTGAGCATGTCCGTATCTTTCATACCACAAGCAATATGGATCATGCGGAAATTTCATTTGCGAACGAAGTCACACCGAAGAATGCTTATGAGTTAAAGCAGCTTGATTTCTTACCGGGTACTTTTATCGTAGTTGAGAACCCAAAATGGGTCGCTGCTATTGTTTCGATTGTGATTAGTATTGCGATCGCATTTTTAATGCCGACTCCATCGATAGCCCAGACTACTCAAAATACTAACCAGTCTTCTTCGGCAAACAATGAACTTTCTAACCGTGAAAACAAGATCCGGGTGAATGGTCGTATTGCTGATAACTATGGAGCTGGGTGGAATACTCCCGACCTAATCGCAGTACCTTACAAGGTATATGAAAATAACGTTGAAGTTGAGCATGTAGTGGGCTGTATTGGTCGTGGACACTATAAAATCAATGGAGCTTATGACGGTGAAACCAATATTGTCGATATTGCCGGTGCATCGGTAGAAGTCTATCGACCAGGTGTCGATATTGTCTCGGGTGAGCCATATTTCTCGCTTGGTACCGAAATTACAACTCCACCCTTAACGGTTCAGCATCAAACCTCTGTTAATGGCCAAGTTCTCCGTCCAGCAGATACACAGTCTTTAGAAGGTGCGAACTACCTTCATTTTGCATATCCAAACGAGATCCTGCGAGCATCTGCAAACAATACTGATTTAACAACTAAATTTGTTAGTAATGACCGGGTAGAAATCACAAATGCTTCGTTTACTTACAACGGCCAGACTTATGATTTAAATGGTACATATAGCGTTCTATCGGTAGCTGATGACCGTATGGCATTGTCTAATCCGGCTGCGGTAAACCCCAATTGGCTAAAGCTAAAGGAATTATCAAATCAGCAAACTGGTGCTTTATCTCCAAAGCTTTCATCTATTGGCGAGAAGTGGATTGGGCCATTCATTCTAGACAATGTCGAACGAAGTCGGGTGCTGTGTAATTTTGTGGCCACCAATGGACTTTATACCGTTTCTTCAGGTGGAAATCAGGGAGCTGTAAACGTCACGATTGAAGTAGAAGTAACGCCGGTAAATGAATCGGGTGCAGCCATTGGCAATCCAATGCTGAAGCAGATCATCCTAAAGGGTTCAGCAAAGTCACGTCAGACAGTTGGTGCAACGCTGGATATGGTGACATTTCAAGGTCGCTGTAGTGTCCGCGCACGCCGTTTAACACCAACACCGGCGGTTACAACGGTAGTAGATGATGTGAAGTGGCAAGCACTATATGGTGCATATCCATTACAAAGCACAACGTATGAGCATGAAACGGTTTTCCGTGCACGTACATATGCAACCACTGGAGCTTTATCTGTTAAGTCACGTAAGATCAATTTTGATCTTCAGCGGATGTTGCCGACTTATAAAAACGGCGCAATGACGACAGAGCTATTTCCAACATCAAGCTTTGCTGATGCACTGGTTTCAATGGCACTTGATGACAAGATTGGTCGCCGTACGATCGACGAAATAGATCTGGAAAATATCTACCGAACTTATAACAATGTAGTTGATTATTTTGGAACACCACTAGCGGCAGAGTTCTGCACCACTATTGATGATACAAACCTATCTTTTGAAGAGCTGGTTACCAATCTTTGTGATGCAGTGTTTTGTACTGCATATCGTCAAAATAATAAGCTCAAGCTTTATTTTGAACGGCCAACTGATAACTCGGTAATGCTGTTTAATTTCAGGAATATCATTCCGGATAGTTACAAGCATGATCTGACCTTTGGTGTAATGGATGACTACGATGGACTGATCTATGAATACACTGATCCGACCGACGATAGTCGTATCAATATCTATTTGCCAGACAAAGGAGCAAAGAACCCGAAAGAAGTGAAATCAGTTGGGGTGCGAAACAAGTGGCAAGCTCATTTTAATGCGTACCGGATCTGGAACAAGCTTCGGTTTCAACGTAAATCCATCACCTTTGATGCGGCGCCTGAGTCTGAATTGCTTGTGCTACGTGACCGTATTGCCGTAGCAGATTATCGCAATGGTATTCATCAAAGCGGGGAAGTGGTACAGCAAGAGGGTTTAATCCTCACCTTAAGCCATGATGTAGATTTCATTGCAGGCAAGAGCTATGTGATCTATCTGCAAATGGGGGATGGCACAGTGGACCTTATTCCTGTTACCGCTGGATCTGCCAAGAACAAGGTGGTTTTAGGCCGTTTACCGAACGGGGCCTTAAAGCTTAGTCCTGATGATTTTGTGAATACTATCTATACGGTGGTTAATGACGATACCAAAGGCTCATTGCCTTATCTGGTTGCAAAAAGAGAACCAGCTGACCAGTTCTCTAATACCATTACTGCAATTAATTACGATGAACGTTATTACCTCAATGACAAGGACTTTATTGATGTGCCAGTAGATGATTCACCGATTTACATTCGATATGACCAGTTGGATATTAATCTGGCGCGTTTATATCAGATGCAAAGAGGGGATTTGCCAACGACTGGAGAAATCAGTTTTGTAGTTGAAGCAGGTGCACTGGTTTCAAGTTCAAGTTCTTATCGACCGGAAACCAGATTTGTCTATAAATTCGACTATAAGTCTAGTCCTGCAAAACGAGAGTATATCGTTCCAGCTGCATCAGAATTACCTGCTATTGATACTGGTGAGTTCCCACCTGATCTGGTGGTGAATCTGACGATTAAAGGTGCTGTTGTTGGACGTGGTGGTGATGGCGGGTTGCCACATCTAGCTTACGGAGATTGGGAAAAAGATTCAGACTTCAATTTTACCAAAACCCGGCGTGATGGTTTTCAGGGTGCACCAGGTTTATTGAATCGACACAGCAAACTAAACCTGATTATCGATGGAGGGACGTTAGCTCGAGGCGGCTCAGGTGGTGGAGCAACACCAAGTGGTATTTACACTGGATCATCTTATGGGGTTCAGGGAATTCCCGGTGGTGCTGGAGCACCATTTGGTCGGGTCATGACTGGACAGCCGATTTCAAATGACTCACAAGATTATCGCCTCTATCTGGAGAGTTATTTATTGGTTATGAAAATCACTGATGCTGAAGCTTCGGTACCCGGTAAAGGTTACCGAACCCAAAATGACCGTTATGGGTCTCCATTATCAGGTGATGGTGGAAACTGGGGCGAACGTGGTACCAAGTCTACCAATGATGGAACATGGAACTGGCAATACCATGGCACTACTGAAGGCCAGCCGGGGCCGGGTGGACCTGCAATTGTTGGGGTGGCGCCGCTAACAACTCAATTGATTAATGGAGGGAAAATCTTGCAAACCCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4dee286eb6e008b950386cee4b5f46ca8f6298c77033af8b1269ad71108a909e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2803
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50