Protein

View in Explore
Genbank accession
BDR25214.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MATEKKSLMIPPIGTKGRYELISPFDKLIKPNTLYVNSAVRAFIDIENNGRNVYDTYYKPLNIDISEYNKDRENGEYIVTLTTEQYNPVYVPSSYIARYPDLNGVPYQQTVLSASLGALPVTLDLTNLQAKVAGVISDVIGVEPVINLGSMPLMSDVTPQQHEAAENAREAKIKDRETDYARIVKLEADNTSLSQRLAIAENLLIENGIIS
Physico‐chemical
properties
protein length:211 AA
molecular weight: 23454,34150 Da
isoelectric point:4,83912
aromaticity:0,07109
hydropathy:-0,25071

Domains

Domains [InterPro]
IPR055618
STR
8–208
IPR055618
Coil
Unmapped
183–203
Coil
BDR25214.1
1 211
Architecture
STR
STR 8-208 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. 30-1
[NCBI] 		2972141 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR25214.1 [NCBI]
Genbank nucleotide accession
LC727696 [NCBI]
CDS location
range 14430 -> 15065
strand -
CDS
ATGGCTACTGAGAAAAAATCTCTAATGATCCCACCAATTGGGACTAAAGGGCGTTATGAGTTAATTTCACCTTTTGACAAACTCATAAAACCCAATACACTTTATGTCAATAGTGCTGTACGAGCATTTATCGATATTGAGAATAATGGTAGAAATGTTTATGATACTTATTATAAACCATTAAATATTGATATATCGGAATACAATAAAGATCGTGAGAATGGTGAATATATTGTTACTCTCACGACTGAGCAATATAACCCGGTATATGTACCAAGCAGTTATATCGCACGTTATCCTGATTTGAACGGTGTGCCATACCAGCAAACTGTTCTATCCGCATCACTAGGGGCTCTTCCAGTAACATTAGACTTAACTAATCTACAAGCTAAAGTAGCCGGTGTTATTTCTGATGTGATTGGAGTAGAACCTGTTATAAATCTTGGGTCAATGCCTCTTATGTCAGACGTGACACCACAACAACACGAAGCAGCAGAAAATGCACGTGAAGCGAAAATCAAAGATCGTGAAACTGATTACGCTAGAATTGTTAAGTTAGAAGCAGATAACACAAGTCTATCACAAAGGTTAGCAATTGCAGAGAATCTTCTCATTGAGAATGGTATTATCTCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dabaa7b74c5cfb61fe1f7b2b7ab596381e89f170bed6af17fa3f5faf5b7aa1e2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4359
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage 30-1 Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank