Protein

View in Explore
Genbank accession
AZF92307.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MQIWIHDKSMRKVCALNNEIPGMLPYTNSQWHQYLEYSTSTLDFTIPKFVNGKLHDDIKYINDQMYVSFYYDNSYHVFYVSQLVENDFSFQVTCNNTNLELAAEIERPLASVDGAKTLEWYLQTLDLLGFAGLEVGFNEIPDRTRTITFESQNGTKLEQLHSLMNQFDAEFVFRTDLNRDGTLKKFVIDIYQRPDENHHGIGKVRGDVTLYYQTGLKGVQVTSDKTQLFNAGYFVGKDGLTLGSVVFEEKNELGQVEFYSFKDSPMVYAPLSADKYPSHMNTTNEDRWTRRDFQTEYSDVDSLKAYALRTIKQYAYPLMTYTVSVQSSFIENYKDINLGDTVKIIDNNFRGGLALEARVSEMIISFDNPTNNSVVFTNFRKLDNKPSSELQQRIDEIVSKSLPYHVEIRTTNGTVFKNGIGRSTVKPVLKQGDKIVDATYRFVIDGTIKYSGMTYDMVASEINQPTTLTISAWVDNKEVASEEVTFVNVSDGKQGPKGERGPQGPKGDRGNDGIAGKDGVGIRNTSVVYGLSVSETVPPTDWSQNPPALIKGQWFWTKTVWNYTDGTSETGYQKTYIAKDGNDGNDGIAGKDGVGIRNTTITYAIGTSGTVAPTNGWSTQVPNVPAGQYLWTKTVWDYTDNTSETGYSVAKMGEQGPKGDRGPQGPKGDRGERGLQGLRGIQGPKGDQGIPGPKGADGKTQYTHIAYADTISGSGFSQTDVNKAYIGMYQDFNAYDSKNPQDYRWSKWKGSDGKDGIPGKAGKDGRTPYVHFAYADSADGQKGFSLTQTGRKRYLGVLTNFFKEDSTNPEDYTWNDTAGSISVGGRNLLKGSKGPFNPDRKPTDFDNYVYYENETSVYLEQGKQYIISAKTDGNFTKWHNGGIESDNITLWLFHFWDVVDIVSDSNTGTTGTQFTWNHPTGTYHLRVNTYHKTAIKSVWEVKIEEGTIKTDWTPAIEDIQDEIDSKADAAMTIEQINALNERAGIIKAEMEAKASAEILNNWIKNYQDFVKANETERAAAEKALISSSQRVSTIAKELGELSDRWNFIDTYMNSSNDGLVIGKNDGSSGIMINPNGRISMYSAGEEVMYISQGVIHIENGIFSKTIQVGRYREEQYHLNPDMNVIRYVGGF
Physico‐chemical
properties
protein length:1131 AA
molecular weight: 126528,92750 Da
isoelectric point:5,26365
aromaticity:0,11141
hydropathy:-0,60681

Domains

Domains [InterPro]
DC_0109
STR
1–1130
DC_0109
IPR010572
ENZ
141–381
IPR010572 IPR050149
G3DSA:1.20.5.320
STR
492–537
G3DSA:1.20.5.320 IPR008160
G3DSA:1.20.5.320
STR
671–723
G3DSA:1.20.5.320
AZF92307.1
1 1131
Architecture
STR
STR 1-1130 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC595
[NCBI] 		2365036 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF92307.1 [NCBI]
Genbank nucleotide accession
MH937459.1 [NCBI]
CDS location
range 14979 -> 18374
strand +
CDS
ATGCAAATCTGGATTCATGATAAAAGTATGCGTAAAGTGTGTGCTTTGAATAATGAAATTCCCGGAATGTTGCCATATACGAACAGTCAATGGCATCAATATCTTGAATACTCAACAAGCACGCTTGACTTCACAATTCCTAAGTTTGTAAATGGAAAACTTCACGATGATATTAAATACATCAATGATCAAATGTATGTGTCGTTTTATTATGATAATTCCTACCACGTTTTCTATGTATCGCAACTCGTTGAAAATGATTTTAGTTTTCAAGTGACTTGTAACAATACCAACTTGGAACTAGCAGCAGAAATAGAGCGGCCGTTAGCTAGTGTTGACGGTGCTAAAACACTTGAGTGGTATCTTCAAACCCTTGATTTACTTGGTTTTGCTGGCCTTGAAGTTGGTTTCAATGAGATTCCTGATAGGACAAGAACTATCACGTTTGAATCACAAAATGGTACAAAACTAGAACAGCTTCATAGCTTGATGAATCAATTCGATGCAGAGTTTGTTTTTCGTACAGATTTAAACCGAGATGGTACTTTAAAAAAATTTGTCATTGACATTTACCAACGACCAGATGAAAACCATCACGGCATTGGAAAGGTTCGAGGGGATGTAACTCTTTACTATCAAACAGGTTTGAAAGGCGTTCAAGTTACTAGTGATAAAACGCAACTATTTAACGCTGGATATTTTGTTGGAAAAGACGGACTAACGCTAGGAAGCGTTGTGTTTGAGGAAAAGAATGAGCTAGGACAAGTAGAGTTCTACTCATTTAAAGACAGTCCGATGGTTTACGCACCTTTATCAGCAGATAAATATCCATCACACATGAATACTACCAATGAAGATAGATGGACACGTAGGGACTTTCAAACAGAATACAGTGATGTTGATTCCCTCAAAGCTTATGCCTTACGTACTATCAAGCAGTATGCTTATCCACTAATGACTTATACTGTCAGCGTTCAATCTAGTTTCATTGAAAACTACAAGGATATTAATCTAGGTGACACTGTTAAAATCATCGATAATAATTTTAGAGGTGGTTTAGCCCTCGAAGCGCGTGTATCTGAAATGATTATCAGCTTTGACAATCCCACAAACAACTCGGTTGTTTTTACTAATTTCAGAAAATTGGATAATAAACCGTCTAGCGAATTACAACAACGTATCGATGAGATTGTTTCTAAGTCATTGCCATATCATGTTGAGATAAGGACCACGAATGGTACAGTATTTAAGAATGGTATTGGTCGTTCTACTGTTAAACCAGTTTTGAAACAAGGCGATAAAATTGTTGATGCAACTTATCGATTTGTGATTGACGGTACTATTAAATATTCAGGTATGACCTATGATATGGTAGCATCAGAGATTAACCAACCAACCACGCTTACTATCTCAGCGTGGGTAGATAACAAAGAAGTAGCTTCAGAAGAAGTTACTTTTGTAAATGTATCAGATGGTAAACAAGGACCAAAAGGTGAACGTGGTCCACAAGGTCCTAAAGGTGATAGAGGTAATGATGGAATTGCAGGTAAGGATGGTGTTGGTATTAGAAATACCAGTGTCGTATATGGATTATCTGTATCTGAAACTGTACCACCTACAGATTGGTCTCAAAATCCACCAGCATTAATTAAAGGTCAGTGGTTCTGGACTAAAACAGTCTGGAATTATACCGATGGAACATCTGAAACAGGTTATCAAAAAACTTATATTGCCAAAGATGGTAACGATGGAAATGACGGTATAGCTGGTAAGGATGGAGTCGGTATTCGTAACACCACGATTACTTATGCAATCGGAACATCTGGAACAGTAGCACCAACGAATGGTTGGAGTACTCAAGTGCCGAATGTACCTGCTGGACAATACCTATGGACCAAGACAGTATGGGATTATACTGACAACACTAGTGAAACTGGATATTCAGTCGCTAAAATGGGCGAGCAAGGTCCAAAAGGCGACCGTGGTCCACAAGGTCCTAAAGGCGACCGTGGCGAGCGAGGTTTGCAAGGCTTACGGGGTATTCAAGGACCCAAAGGTGACCAAGGGATTCCCGGACCTAAAGGTGCTGACGGAAAAACGCAATATACACATATCGCTTATGCCGACACAATCTCAGGTAGTGGCTTTAGTCAAACAGATGTCAATAAAGCCTATATTGGTATGTATCAAGACTTCAACGCTTATGATAGTAAAAACCCACAAGATTATCGATGGAGCAAATGGAAAGGTAGCGATGGTAAAGATGGTATTCCTGGTAAGGCTGGTAAGGACGGACGTACGCCTTATGTACATTTTGCCTATGCCGATAGTGCCGATGGTCAAAAGGGTTTCAGTTTGACACAGACTGGACGTAAGCGCTATTTAGGTGTGCTTACCAACTTCTTCAAAGAAGACAGTACTAATCCAGAAGATTATACTTGGAATGACACTGCGGGTAGTATATCTGTTGGTGGTAGGAATCTATTGAAAGGTTCGAAAGGACCTTTTAATCCTGACCGTAAACCTACAGATTTTGATAATTACGTTTATTATGAAAATGAAACTTCTGTCTATTTAGAACAAGGAAAACAATATATCATCAGTGCCAAAACAGATGGTAATTTTACTAAATGGCACAACGGAGGAATCGAAAGTGACAATATCACACTCTGGTTATTTCATTTCTGGGATGTGGTTGACATTGTTTCTGATTCAAATACAGGTACTACAGGAACGCAGTTTACTTGGAATCATCCGACAGGTACATATCATCTACGTGTAAATACATATCATAAAACAGCAATCAAATCTGTTTGGGAAGTGAAGATTGAAGAAGGGACAATCAAAACTGATTGGACACCCGCCATCGAGGATATACAAGATGAAATTGATTCCAAAGCCGATGCTGCTATGACGATTGAACAGATTAATGCGCTTAATGAAAGGGCTGGAATCATTAAAGCAGAGATGGAAGCCAAAGCAAGCGCTGAAATTTTGAATAACTGGATTAAAAATTACCAAGATTTCGTTAAGGCAAACGAGACCGAGAGAGCTGCAGCCGAGAAAGCTTTGATTAGTTCAAGTCAGCGGGTATCAACCATTGCTAAGGAATTAGGTGAACTGTCTGATCGTTGGAATTTCATCGATACTTACATGAACTCATCAAATGATGGGCTTGTGATTGGAAAGAATGACGGTAGCTCTGGCATAATGATCAACCCTAACGGTCGGATTTCAATGTATTCAGCAGGGGAGGAGGTCATGTATATTTCGCAAGGTGTAATACACATCGAGAACGGGATCTTCTCAAAAACTATCCAAGTTGGTCGATATCGTGAGGAACAGTACCATCTTAACCCAGACATGAATGTCATTCGTTATGTAGGAGGTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e0ef7011cde8861b8294922fd8cd5c7993bbd4a68cb5491d39e32f2e4006778e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7245
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank