Protein

View in Explore
Genbank accession
XOD42318.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MATLPESPEYASGIYQIETSDPVVGGPGGVSNKQGEQLACRTAWLKVQVDGLVTGSIVAGKAARLSAVRTLSITGAGTGSAAFDGSANAAIALTLANSGVSAGTYSKVTVNAKGLVTAGAALVASDIPALDWSKITTGRPTTLGGYGITDALAKSDAVTSPTPNKLLLMNSAGQLPASITGNAATASKWAIARTLSISGDATGSGTLDGSANASITVTLANTGVADGTYTKVRVNPKGLVIGATTLTTDDIPSLDASKITSGMFADARLPWYAQGLCTSAPNTTDPNTTNIPLILTNHENGPIPGQYFYIQTMMYNQRNGNAGQIAVRYAANAEMYVRYMYDVGNKRGVWSAWKRCDVGGSFAKEPDSRIGDAFDLNTLESSGWWYQTANGYAASGANYPIAKAGRLMVYRVSSDFIYQTYQTHDGFMFHRCRYAGTWQPWREQWSTVNFNPANYVAKSEYSWASLPGKPATFPPSGHNHDASQITSGVLPLARGGLGNGAGQAQTALKLATARTISITGAGTASVSFDGSGNVSLPLVVNASDIQTGILPLARGGTGANNAATARSNIGAGTIATASLGTSGWWQDNDTGLIRQWGVTASIGMDSSATITFPRAFPRNVFGANWKQRAPGDQASSGNQVITNLTTTNMTIYQGDNTAGPVYWEAWGY
Physico‐chemical
properties
protein length:668 AA
molecular weight: 69575,74960 Da
isoelectric point:8,77333
aromaticity:0,08533
hydropathy:-0,14970

Domains

Domains [InterPro]
DC_1619
ATT
10–160
DC_1619 cd19958 cd19958 G3DSA:2.60.40.3940
DC_1619
ATT
118–466
DC_1619 IPR054075
DC_1028
STR
387–666
DC_1028
XOD42318.1
1 668
Architecture
ATT
STR
ATT 10-466 | STR 467-668
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Komp_PAO1_1
[NCBI] 		3390399 Viruses > unclassified bacterial viruses >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD42318.1 [NCBI]
Genbank nucleotide accession
PQ287647.1 [NCBI]
CDS location
range 19509 -> 21515
strand +
CDS
ATGGCAACCTTGCCCGAATCCCCTGAGTACGCATCAGGCATCTACCAGATCGAAACGTCGGACCCTGTGGTCGGTGGCCCCGGTGGGGTTTCCAACAAGCAAGGAGAGCAGTTGGCATGCCGGACAGCCTGGCTCAAGGTGCAGGTCGACGGCTTGGTCACCGGCAGCATCGTGGCAGGCAAAGCTGCACGTCTATCTGCCGTGCGTACCTTGTCCATCACTGGGGCAGGTACCGGCAGCGCAGCGTTCGACGGCAGCGCGAATGCTGCCATCGCCCTGACGCTAGCCAACAGCGGTGTGTCGGCAGGTACCTACTCGAAGGTGACGGTCAATGCGAAAGGCCTGGTAACGGCCGGCGCGGCGCTGGTAGCGTCGGACATCCCGGCGCTTGACTGGAGCAAGATCACCACCGGCCGCCCGACAACGCTGGGCGGATACGGCATCACCGACGCGCTGGCCAAGAGCGATGCGGTGACCTCTCCGACGCCGAACAAGCTGCTGTTGATGAACAGTGCTGGACAGCTTCCCGCCTCGATCACGGGCAATGCCGCGACGGCCAGCAAGTGGGCCATTGCGCGCACGCTATCGATTTCAGGGGACGCGACCGGTAGCGGTACGCTCGATGGCAGCGCAAACGCCAGCATTACGGTTACGCTGGCCAATACCGGTGTCGCCGACGGCACCTACACCAAGGTCAGGGTAAACCCCAAGGGTCTAGTCATCGGTGCAACCACGCTTACTACCGACGACATTCCCTCTCTGGACGCCTCGAAAATTACGTCGGGCATGTTCGCCGATGCCCGCCTGCCCTGGTACGCACAAGGGCTATGCACCAGCGCACCCAACACGACGGACCCGAACACCACGAACATCCCGCTCATCCTCACGAATCACGAGAACGGTCCGATTCCGGGGCAGTATTTCTATATCCAGACGATGATGTACAACCAGCGCAACGGCAACGCTGGGCAGATTGCCGTGCGCTACGCGGCGAACGCCGAAATGTATGTGCGCTACATGTACGACGTCGGCAACAAGCGCGGGGTCTGGTCCGCCTGGAAGCGGTGCGATGTGGGTGGCTCGTTTGCAAAAGAGCCCGACAGTCGCATCGGAGACGCTTTCGATCTGAACACACTTGAATCATCCGGCTGGTGGTATCAGACCGCCAATGGCTACGCAGCCAGCGGGGCAAACTACCCGATTGCAAAGGCGGGTCGGCTGATGGTTTATCGAGTCAGCAGCGACTTCATCTATCAGACGTACCAGACACATGACGGATTCATGTTTCATCGTTGCCGGTACGCGGGTACCTGGCAGCCGTGGAGGGAGCAGTGGTCGACAGTCAACTTCAACCCAGCAAACTACGTGGCGAAGTCGGAGTATTCCTGGGCGTCCTTACCTGGGAAGCCGGCAACCTTCCCCCCATCGGGGCACAACCACGACGCAAGCCAGATTACCTCTGGTGTTTTGCCCCTTGCGCGAGGAGGGCTGGGTAACGGAGCTGGCCAGGCTCAAACAGCCCTCAAGCTGGCAACTGCCAGAACCATTTCAATTACGGGGGCGGGAACAGCCTCCGTATCGTTCGACGGCAGTGGCAATGTCAGCCTGCCACTGGTGGTTAACGCCAGCGACATTCAAACCGGGATTCTGCCGCTCGCGCGAGGTGGGACAGGCGCAAACAACGCTGCCACGGCGCGCAGCAATATCGGCGCCGGAACTATCGCAACCGCTTCACTTGGCACCAGCGGCTGGTGGCAGGACAACGACACGGGACTTATCCGACAGTGGGGCGTCACGGCCTCTATCGGCATGGACAGCTCGGCGACAATCACCTTTCCCAGGGCATTCCCGCGCAACGTGTTCGGGGCCAACTGGAAGCAACGCGCACCAGGTGATCAAGCTTCGTCAGGCAACCAGGTAATCACCAATCTGACGACCACAAACATGACGATCTACCAGGGCGATAATACTGCTGGCCCTGTCTATTGGGAGGCGTGGGGATACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e8f3d1dd1e149b52013064b81d837a0a27b8883ef7c26986e4140c712318ed08
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7055
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50