Protein

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Genbank accession
YP_004957866.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MISQFNQPRGSTSIEVNKQSIARNFGVKEDEVIYFTAGIDLSGFKVIYDESTQRAYSLPFGIVSGTTAISLDERAILTHSAGSVDLGELAVSREEYVTLPGSFNFGHTINVKNELLVHDDKKYRWDGSLPKVVAAGSTPDSSGGVGLGAWLSVGDAALRAELNTKVSDGTFPATIKYKYGLPSVIDGAIYRTVQDKLDDFVFLEDFGGKDDAGSTDNSIAFRKAFASGARKIRLRGSGVYGMATRDIELPAKYEIIGNAKNPEIKYLGTDTSFTMFTLTGSGPASNQWKQGGMFRDLIISSDVKINWMLGRHVQNLDYDRVFFYNSATVLNNYHYVNFTRCERWGSAFIGRADLNTIQFISESPKFHLCFSSGSPIDVWDTADLAITKCTMFAGDYAVRTRVTQKQVTAPDLFAGYPVLITCSVFDAVRGHAWDLEGSVYSTITGNLVSAGRDTNSHGAYIKGGRSLSLTGNVFTYCGNYGLVLEDVQQSGFVGNVFNGNKTGGLGTLACKDLSIVGGSMGTTYVRGGYYTQPVGYSDISSNSTGILLSGVAFDEALTTKVYLDTSITTRNKVINCSGVPDTIARGSTANRPANPQASYQYYDTTLGIPIWWNSVSGTWKNAAGADV
Physico‐chemical
properties
protein length:627 AA
molecular weight: 67838,17270 Da
isoelectric point:5,97119
aromaticity:0,11005
hydropathy:-0,14817

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–94
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334
DC_1953
STR
1–625
DC_1953
IPR040775
RBD
90–155
IPR040775 IPR011050
IPR039448
ENZ
378–506
IPR039448
YP_004957866.1
1 627
Architecture
ATT
STR
ATT 1-160 | STR 161-625 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004957866.1
1 627
Domain Start End Length (AA) Confidence
N-terminal 1 215 215 0,9880
Central domain 216 574 360 0,9872
C-terminal 575 627 52 0,9669
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-215
Central
216-574
C-terminal
575-627

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Cba120
[NCBI] 		2886902 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004957866.1 [NCBI]
Genbank nucleotide accession
NC_016570.1 [NCBI]
CDS location
range 124151 -> 126034
strand -
CDS
ATGATTTCTCAATTCAATCAACCACGCGGCTCCACTTCCATAGAAGTTAACAAACAATCTATCGCTCGAAATTTCGGTGTCAAAGAAGACGAAGTCATTTATTTCACTGCTGGTATTGATCTCAGTGGATTTAAAGTAATTTATGATGAGTCTACCCAACGGGCTTATTCTCTCCCTTTCGGTATTGTTTCAGGGACAACTGCAATTAGTCTGGATGAAAGAGCTATCCTCACTCATTCCGCTGGCTCTGTTGACCTTGGGGAATTAGCAGTAAGCCGCGAAGAATATGTGACTTTACCTGGTTCTTTTAATTTCGGCCATACCATTAATGTGAAAAATGAACTTCTTGTTCACGATGATAAAAAATATCGATGGGATGGTTCTTTGCCAAAGGTAGTTGCCGCTGGTTCTACTCCAGATAGTTCAGGTGGTGTTGGTTTAGGTGCATGGTTGAGTGTTGGTGACGCGGCATTGAGGGCTGAGTTAAATACAAAGGTCTCAGATGGAACCTTCCCTGCAACTATAAAATATAAATATGGGTTGCCATCTGTTATTGATGGTGCTATATACAGAACTGTACAAGATAAGCTGGATGATTTTGTTTTTCTGGAAGACTTTGGAGGCAAGGATGATGCTGGTAGTACCGACAATAGCATAGCGTTTCGGAAGGCTTTTGCTTCTGGTGCAAGAAAAATTAGGCTGCGTGGTTCTGGTGTTTATGGTATGGCGACCAGAGATATTGAGCTTCCAGCAAAATATGAAATTATCGGCAATGCAAAAAATCCAGAAATCAAATATTTAGGCACAGATACATCATTCACTATGTTCACCCTCACTGGTAGTGGGCCTGCTTCTAACCAGTGGAAACAGGGTGGCATGTTCCGTGATTTAATCATTTCTTCTGATGTGAAGATCAACTGGATGCTAGGCCGACATGTACAGAACTTGGATTATGATCGTGTATTCTTCTACAACTCAGCTACTGTGCTGAACAACTATCACTATGTGAACTTTACTCGATGCGAGCGTTGGGGTAGTGCCTTCATTGGTCGTGCTGATTTGAACACAATACAGTTCATTAGTGAGTCACCTAAGTTCCACTTGTGCTTTAGCTCTGGTTCACCAATTGATGTGTGGGACACAGCAGACTTGGCAATCACCAAGTGTACTATGTTCGCAGGTGATTATGCAGTTCGTACCCGTGTAACACAGAAACAGGTAACAGCACCAGACTTGTTCGCAGGATACCCTGTGCTCATCACGTGTAGTGTGTTCGATGCGGTACGTGGCCATGCTTGGGATTTGGAGGGTTCGGTCTACTCTACCATCACTGGCAACCTTGTGAGTGCTGGACGTGATACAAACAGTCACGGTGCATACATCAAGGGCGGGCGTAGTTTGTCACTTACTGGCAATGTGTTCACTTACTGTGGTAACTATGGATTGGTCCTCGAAGATGTACAGCAGTCTGGTTTCGTTGGTAATGTCTTCAACGGTAATAAGACAGGCGGTCTAGGAACCCTCGCCTGCAAAGACCTCAGCATTGTTGGTGGTAGTATGGGTACAACCTATGTACGTGGTGGGTACTACACTCAGCCTGTAGGTTATTCTGATATATCAAGTAACTCAACTGGCATTTTACTTAGTGGTGTTGCTTTCGATGAAGCCTTAACTACTAAGGTCTACTTGGACACTAGCATCACTACAAGGAACAAAGTTATTAACTGCTCAGGTGTTCCTGATACAATAGCTCGTGGTAGTACAGCCAATAGACCTGCCAATCCACAGGCAAGTTATCAATATTATGATACTACTTTAGGCATTCCTATCTGGTGGAACTCAGTTAGCGGCACATGGAAAAACGCGGCTGGAGCTGATGTTTGA

Genome Context

Genome Context

Tertiary structure

1 / 3
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Genome of vB_EcoM_CBA120 Kutter,E.M., Blasdel,B.G., Kropinski,A. and Brabban,A.D. 1980-09 — GenBank