Protein

View in Explore
Genbank accession
YP_011108471.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAKEKIDFDDGLNDFDMNMDGFDDDPFNPRESSGGSRSPVTKVGKSMLSGAGQETKNPTFYKNVLKAAMPDSFSVMLDNVDTTMDITSRTYNQAMREARPMMVQARRVAGSINRLVPSPFQSKIDAYLKSKDKKGLDNVEVDMEEAGVAQGMGDIFAEKENDDQKLEKAEKLIEFVNEKEYRQNVLGQLQSINRQLSIQTQNQLRVQRAWQQKSLEVQLRQLYVSRRTMEITKQGMEENSALLRDIVKNTGLPDIQKEQQSETLARLTRERVFGAAQSKVADWARQNQYLRAVGKRATDAIRSKVNEFQFAFQSAADMFESAEEQMAAAREYGIDTTQMAGELAGANVANRIGGWFGKNVGKRLKLDRADNFFRTINHKTANVAHVGSRFGKKLKRGDSRVGHWIGDILDVPFRADTTVAQGGLANLEMDPGRMGTENRKLRALEETLPGYLSRILQEVTGIRTGELPERLVVDPQRGTFMALKESTANLAQRVLSDGAIESSQNNLNSLIKDMGGDKLSRKDRVELAKYLREKSKDQTWGFSPEALLDENNGLSGRLRGRLGDSLSARYGLVKDENGKWKAPLSGMSGIRSLERDAKSYGNFRDYSSEVYRNVKAIHSLGGIEQLLEAGLVRWDDDTQTYELDSNYVERRSNAKYRKLQRRGKLSGDSEVGAGNNGPRPGGDNPGTPKPGPLPMGSPLGGGEEGDQGSRISRWFGRGGGGGGSDKAIIRAIRDQTESILDAFDNMPVRDIQEEQADYLADILERLEAGVSTFGGAGSPPPRKGLLRRGAGLAKSAVKGMWKAGAYPFKFARVMAKQAFRPVKWLGKKSFKRIKGLGEKAWGKASALVTDVYIKGQDGLKRALERGVMIAGGYTDVNTGKIIKSIKDITGPVINNATGAIVLTQEDFDNGLMNSLGKRLKVGLIGGIKSAIKRAAGIIASPITKPLGWVKSGIALAKKMLLTPPDVYLRGQMDKPVLYGQQMYNGMYWSAATNKVVRYIGDIDGDIYTWDRETMQKRIVLTAQQIQDPGLVDYAGKPLKGFMKKWKDRIGGAIDFLKKNLNPMNWIRRGKDLVKKGLGFVGGAFGKVGKALGLKGIESGGWTKRIYRLLWNKFNDLPLNTGLKAATSQLGEAAGKAGSRIKDWWANRKGFGLKGKLGGSKIGMLLSGLWSKKGNWRDLFKRDSLKDRLDEMRDREGSWVNRAAKAAGRIKESVKDKADKARKFPWLATVMGGFGIVRGALNVLKDKLLGGIGAWIPKILTAIKNTKLAQSGMSMLGDLLGGGGGRGRGGFIRRGARWLGKAAWNTVRHPIKTLGKVIKSPFKLAGGALRLGMKALPWVARGAMMLLTSPVAWAVAAAAGAGYLIYKGYKAYQGRITSVREMRLAQYGFAKGEDSDKLGKVLALEEAVLKAVKWDQNGVPSLGPIKYPELIQAFGIQMTAEKSVMSWANWFANRFRPVFLKNIQEIRRLDEKATILDANTSLAKGQLPSYALATRLPDTNPDGSKGPYFIEDSPFQNHSCIIGTDIVDSTIQAVVGEYSKDAKKFKEKARTDAGLANAKNVQLTPTNGKNMKAGLQLQKDDRVFGAGDVKANVGKITGDPDKDLKIIQNNLIDDVTAIRMKLYGMLELSKSQVNIIWRLEDQLLKDQNIVVRNKVAEFTGDKNKIVQAWAPVFGVSLGVAADVNDWQFWFDRRFLPVFLNFVTRGSKWLGTDNLLTKIRSAHPEVQYSVAEFMSVAKTEVNGQSTSVWSVNAYPFPMESANTDSLVIKGNMDSLKERIKDEKYAEQLAKKNPSLKYDKNGKLLSDAEYMKKLAQMPGSPLATNAANAAFLAQQGGNSMLNGGGGLQSFDNDKFASVAEITPNGGKASDLPQVDGGAVAAERSPEKRFAMLRPLFEAVAKAIGVDVPTLTAFAMQESAFNPLAAAKGSSAKGLFQFIDGTWQGYVGKLKEFGFSNPQVTDPVANTVAGAMFIRDNINALKGTIGRMPNVPELYLAHFLGPGGARRVLSQPDNASIMTGVNNDQIAANQSVFKNISTIADIKSWAARMMQKGIVFASKNAPGGIPSSGTFSTNLGPSPTEAGSIVNTAQMGTPTPASSGGGAGAMPAMAPSISVGGGSPAPVSNSEVLAGGMRKVSSPSPVASSAVPAVPVPPNREGVEKQREVQAETQAVRVQTEQVNAATAQARARATGATMQQARQTHDVQVEIRDAVQGSESILGEIRDFLKGSSGGPSQQNSPPPNGQEQQKEAMLKNASMNPPVGQKPGNQRPFNSSRRPA
Physico‐chemical
properties
protein length:2274 AA
molecular weight: 247441,73150 Da
isoelectric point:9,78348
aromaticity:0,07124
hydropathy:-0,44046

Domains

Domains [InterPro]
DC_0124
STR
1–2057
DC_0124
Coil
Unmapped
159–179
Coil G3DSA:1.10.530.10
IPR023346
STR
1883–2008
IPR023346
IPR008258
ENZ
1893–2010
IPR008258
YP_011108471.1
1 2274
Architecture
STR
STR 1-2057 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage PCH45
[NCBI] 		2608368 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011108471.1 [NCBI]
Genbank nucleotide accession
NC_091964.1 [NCBI]
CDS location
range 94578 -> 101402
strand +
CDS
ATGGCTAAAGAAAAAATCGACTTCGATGATGGACTCAACGATTTCGACATGAATATGGACGGGTTCGACGATGATCCGTTTAACCCCCGAGAGTCCTCGGGCGGAAGTCGAAGCCCTGTTACGAAGGTTGGTAAGTCCATGTTGTCTGGCGCTGGCCAGGAAACCAAGAACCCTACCTTCTATAAAAACGTATTGAAAGCAGCGATGCCGGATTCCTTCAGTGTAATGCTCGACAATGTCGACACCACGATGGATATCACCTCGCGTACTTATAATCAGGCGATGCGTGAAGCACGTCCGATGATGGTGCAGGCTCGCAGAGTTGCGGGCTCTATTAACCGTCTCGTTCCTTCTCCCTTCCAATCTAAGATTGATGCATATCTTAAGTCAAAAGATAAGAAAGGCTTAGATAACGTAGAAGTTGACATGGAGGAAGCGGGTGTTGCTCAGGGCATGGGTGACATCTTTGCTGAGAAGGAAAACGATGATCAGAAGCTTGAAAAAGCCGAGAAGCTCATCGAGTTCGTTAACGAAAAAGAATATCGTCAAAACGTACTTGGTCAACTTCAATCGATCAACCGTCAGCTTTCAATCCAGACACAAAACCAACTGCGCGTACAACGTGCATGGCAGCAGAAGTCTCTTGAAGTCCAGTTACGTCAGCTTTATGTTAGCCGTCGTACAATGGAAATCACTAAACAAGGCATGGAAGAAAACTCAGCTCTGTTACGTGACATCGTCAAGAACACCGGTCTTCCTGATATTCAGAAAGAACAGCAATCTGAAACACTCGCTCGTTTAACGCGTGAACGTGTCTTCGGTGCTGCTCAATCTAAAGTCGCTGACTGGGCACGTCAAAACCAATACCTGCGTGCAGTAGGTAAACGTGCGACCGATGCTATTCGCAGTAAAGTAAACGAGTTCCAGTTCGCATTCCAGTCAGCCGCTGATATGTTCGAGTCAGCTGAAGAGCAAATGGCGGCTGCCAGAGAATACGGCATCGACACCACTCAGATGGCTGGGGAACTCGCCGGTGCTAACGTAGCAAATCGCATTGGTGGTTGGTTTGGTAAGAACGTCGGTAAACGTCTGAAGTTAGACCGCGCTGATAACTTCTTCCGTACCATTAACCACAAAACAGCGAATGTTGCTCATGTTGGCTCTCGTTTTGGGAAAAAGTTAAAACGTGGCGACAGTCGTGTTGGTCACTGGATTGGGGATATCCTGGATGTTCCTTTCCGTGCCGATACAACGGTAGCCCAGGGCGGGTTAGCTAACCTTGAGATGGACCCTGGCCGTATGGGGACTGAGAACCGCAAGCTGCGTGCGTTAGAGGAAACCTTACCAGGTTACCTTAGCCGTATTCTGCAAGAGGTCACTGGTATCCGTACAGGCGAGCTTCCTGAACGTTTGGTTGTCGATCCACAGCGCGGGACTTTTATGGCGCTGAAGGAATCTACTGCTAACTTAGCTCAACGTGTTCTGTCTGATGGGGCTATTGAGAGTTCTCAGAACAACCTTAATAGCCTTATTAAAGATATGGGTGGCGATAAGCTTTCCAGAAAAGACAGAGTCGAATTGGCCAAGTACCTACGTGAGAAATCGAAAGATCAAACGTGGGGGTTTTCACCAGAAGCTTTACTGGATGAGAATAATGGTCTTTCTGGCAGACTGCGTGGTAGACTAGGGGATTCCCTTTCTGCTCGCTATGGCCTCGTCAAGGATGAGAATGGTAAGTGGAAAGCACCATTGTCGGGAATGTCTGGTATTCGTTCTCTTGAGCGTGATGCTAAGTCTTACGGCAATTTCCGTGATTATAGCTCCGAGGTTTACCGGAACGTAAAAGCGATTCATTCACTCGGCGGTATCGAACAACTCTTGGAAGCTGGGTTAGTCAGATGGGACGACGATACTCAGACCTATGAGCTCGATTCCAATTACGTTGAGAGACGCAGCAATGCAAAATACAGAAAGCTCCAAAGAAGAGGAAAGCTATCTGGGGACAGTGAAGTGGGGGCTGGCAATAACGGCCCTCGGCCTGGTGGTGATAACCCTGGGACTCCGAAGCCTGGGCCGCTCCCTATGGGATCTCCCCTCGGAGGTGGTGAAGAAGGTGATCAAGGCTCTAGGATAAGTCGTTGGTTTGGGCGTGGAGGTGGTGGGGGTGGCAGCGATAAAGCTATCATCCGTGCTATCCGTGATCAGACCGAGTCTATCTTGGACGCTTTCGATAACATGCCAGTACGTGATATCCAGGAAGAACAAGCCGATTACTTGGCGGATATTCTGGAACGTCTCGAAGCGGGCGTATCAACGTTCGGCGGAGCTGGTTCTCCCCCACCTCGCAAAGGCCTACTGCGTCGTGGCGCGGGTCTTGCGAAGAGCGCGGTTAAGGGCATGTGGAAAGCGGGTGCTTACCCGTTCAAATTTGCTCGTGTTATGGCTAAACAAGCTTTCCGTCCCGTTAAGTGGCTTGGGAAGAAATCGTTCAAACGCATTAAAGGCTTAGGGGAGAAAGCCTGGGGTAAAGCATCTGCTCTTGTAACCGATGTTTACATCAAGGGACAGGACGGACTTAAGCGTGCTCTTGAACGCGGCGTCATGATTGCCGGTGGTTACACCGATGTGAATACGGGGAAAATCATTAAGTCCATCAAGGACATTACCGGACCCGTTATTAACAATGCAACTGGTGCTATTGTCCTCACTCAAGAAGACTTTGATAATGGATTGATGAACTCTTTGGGTAAACGACTTAAGGTTGGATTGATCGGCGGCATTAAGTCAGCCATCAAACGAGCAGCTGGGATAATCGCATCGCCGATTACTAAGCCGCTTGGTTGGGTGAAGTCAGGCATCGCACTAGCGAAGAAAATGCTCCTCACCCCTCCTGATGTCTATTTACGTGGCCAGATGGATAAACCTGTTCTGTACGGTCAGCAAATGTACAACGGCATGTACTGGTCGGCTGCTACTAATAAAGTAGTACGCTACATCGGTGACATCGACGGTGACATTTATACCTGGGATCGAGAGACAATGCAGAAACGTATTGTCTTGACTGCGCAGCAGATCCAAGATCCAGGGTTAGTTGACTACGCAGGTAAACCACTCAAAGGTTTCATGAAGAAATGGAAAGACCGTATTGGCGGCGCTATTGACTTCTTGAAGAAAAACCTTAACCCGATGAACTGGATTCGTCGTGGTAAAGATCTGGTTAAGAAAGGACTTGGCTTTGTAGGTGGGGCGTTTGGTAAAGTTGGTAAGGCTCTCGGTCTTAAGGGAATCGAATCCGGCGGTTGGACCAAGCGTATCTATCGTCTGCTTTGGAACAAGTTTAACGACCTCCCGTTAAACACAGGTCTTAAAGCAGCAACAAGTCAACTGGGTGAGGCAGCAGGTAAAGCCGGAAGTCGAATCAAGGATTGGTGGGCTAACCGGAAAGGCTTTGGTCTAAAAGGCAAGTTAGGCGGGTCTAAGATCGGTATGCTGTTGTCAGGGCTCTGGAGTAAGAAGGGTAACTGGCGAGACTTGTTCAAACGCGATTCTCTCAAAGACCGTTTGGACGAAATGCGTGACCGTGAAGGTTCCTGGGTAAACCGTGCAGCCAAAGCAGCAGGGCGAATCAAGGAGTCTGTAAAAGACAAAGCTGACAAAGCCAGGAAGTTCCCATGGCTTGCTACAGTTATGGGCGGGTTCGGAATTGTTAGAGGCGCATTGAATGTCCTCAAGGATAAACTCCTTGGTGGTATTGGCGCCTGGATTCCGAAGATCCTCACTGCTATTAAGAACACTAAGCTCGCTCAGTCTGGTATGAGCATGTTGGGTGATCTGTTAGGTGGCGGTGGAGGAAGAGGACGTGGCGGATTTATCCGACGTGGGGCGAGATGGTTAGGTAAGGCTGCATGGAACACTGTACGCCATCCAATCAAAACGCTGGGCAAAGTCATCAAGTCTCCGTTTAAACTTGCTGGCGGTGCCTTACGTCTCGGTATGAAGGCACTCCCTTGGGTAGCTCGCGGTGCAATGATGTTATTAACCAGTCCTGTTGCATGGGCAGTTGCTGCCGCGGCAGGTGCAGGTTACCTCATCTATAAAGGCTACAAAGCGTATCAGGGACGTATCACATCTGTACGTGAGATGCGTCTTGCCCAGTATGGTTTTGCTAAAGGCGAAGACAGTGATAAACTGGGTAAAGTATTAGCGCTTGAAGAGGCTGTCCTGAAGGCAGTGAAATGGGATCAGAACGGTGTCCCATCCCTGGGTCCAATCAAGTACCCGGAACTGATTCAGGCATTCGGTATTCAGATGACAGCTGAGAAATCAGTTATGTCATGGGCGAACTGGTTTGCTAACCGCTTCCGTCCAGTGTTCTTAAAGAACATTCAGGAGATCCGTCGCCTTGACGAGAAAGCTACTATTCTGGATGCGAACACCTCTCTTGCTAAAGGGCAGTTACCGTCGTATGCGTTAGCAACACGTTTACCGGATACTAACCCTGATGGTAGTAAGGGTCCGTACTTCATCGAAGATTCTCCGTTCCAGAACCACTCCTGTATTATCGGAACAGATATTGTTGATTCTACCATCCAAGCAGTTGTGGGTGAGTACAGCAAAGATGCGAAGAAGTTCAAGGAGAAAGCTCGTACTGATGCGGGCTTAGCGAATGCGAAGAACGTACAGCTTACACCGACTAACGGTAAGAACATGAAGGCTGGGTTACAGCTTCAGAAAGACGACCGTGTGTTTGGTGCAGGTGACGTTAAAGCAAACGTTGGTAAAATAACGGGTGATCCAGATAAAGACCTGAAGATCATTCAAAACAACCTGATCGATGACGTGACTGCGATCCGTATGAAGTTATACGGTATGTTGGAACTGTCAAAGTCCCAGGTTAATATCATCTGGCGTTTAGAAGACCAGTTACTCAAGGACCAGAACATTGTTGTTCGGAACAAGGTAGCGGAATTCACGGGTGATAAGAATAAGATCGTTCAGGCATGGGCTCCGGTGTTTGGCGTAAGCCTTGGCGTAGCCGCTGACGTTAATGACTGGCAGTTCTGGTTCGATCGTCGTTTCTTACCAGTCTTCCTGAACTTTGTAACACGCGGTTCTAAATGGCTGGGCACGGATAACCTTCTCACGAAGATTCGTTCTGCTCACCCTGAAGTACAGTACAGCGTAGCAGAGTTTATGTCTGTCGCTAAGACAGAAGTCAACGGTCAGTCGACTTCAGTGTGGTCTGTTAATGCCTATCCGTTCCCGATGGAATCTGCTAACACGGATTCGTTGGTGATCAAAGGCAACATGGACTCGCTGAAAGAGCGTATTAAGGATGAGAAGTACGCAGAGCAGTTAGCTAAGAAGAACCCGAGTCTTAAGTACGACAAGAACGGGAAGTTGTTGAGTGACGCGGAGTACATGAAGAAACTGGCGCAGATGCCTGGTAGCCCTCTGGCAACCAACGCAGCTAACGCAGCCTTCTTGGCTCAGCAAGGTGGTAACAGCATGCTTAACGGCGGCGGTGGCCTCCAGTCCTTCGACAACGACAAGTTCGCGTCTGTTGCTGAAATTACCCCTAACGGCGGTAAGGCTTCGGATCTTCCTCAGGTAGATGGCGGTGCAGTTGCCGCTGAAAGATCTCCTGAGAAGCGCTTTGCGATGTTGCGACCTCTGTTTGAGGCAGTGGCAAAAGCGATTGGTGTGGACGTCCCGACTCTAACGGCGTTCGCAATGCAGGAATCGGCATTTAACCCGCTAGCTGCGGCGAAAGGTTCAAGTGCGAAAGGCTTGTTCCAATTCATCGACGGTACATGGCAGGGCTATGTAGGTAAGCTGAAAGAATTCGGGTTCAGTAATCCTCAGGTGACCGACCCTGTAGCTAACACGGTGGCAGGAGCAATGTTCATCCGTGATAACATCAACGCATTGAAAGGTACTATCGGGCGTATGCCTAACGTACCGGAACTTTACCTGGCACACTTCTTGGGCCCAGGCGGCGCTCGTCGTGTTCTCTCCCAGCCTGACAACGCAAGTATCATGACTGGGGTTAACAACGATCAGATCGCGGCTAACCAATCTGTGTTTAAGAACATTTCTACCATTGCTGATATTAAGTCGTGGGCTGCACGTATGATGCAGAAAGGAATCGTCTTTGCCAGCAAGAATGCTCCAGGAGGGATTCCTTCATCGGGAACCTTCTCTACTAACCTTGGTCCTTCACCGACTGAGGCAGGTAGTATTGTTAACACCGCTCAAATGGGTACTCCTACTCCTGCGAGCAGTGGAGGCGGTGCTGGGGCGATGCCTGCTATGGCTCCTTCTATTAGTGTGGGCGGCGGTTCTCCTGCCCCTGTCAGTAATTCAGAAGTCTTGGCAGGCGGAATGCGTAAGGTAAGTTCACCATCTCCAGTAGCATCGAGTGCTGTTCCAGCAGTCCCGGTTCCACCGAATCGTGAAGGCGTTGAGAAACAGCGCGAAGTACAAGCAGAGACGCAGGCGGTACGTGTTCAAACCGAACAGGTTAATGCAGCTACGGCTCAAGCGCGTGCTCGTGCAACTGGCGCAACAATGCAACAGGCTCGTCAGACTCATGACGTTCAGGTTGAAATCCGTGATGCTGTACAAGGTAGCGAATCGATCCTCGGTGAGATCCGCGATTTCCTCAAGGGTAGTAGCGGCGGTCCAAGCCAGCAGAATTCTCCTCCGCCTAATGGGCAAGAGCAGCAGAAGGAAGCTATGCTGAAGAACGCTTCGATGAACCCTCCCGTAGGCCAGAAGCCAGGGAACCAAAGGCCTTTTAATAGTAGTAGAAGGCCTGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7361b35facce7823f883c08a799f7fec3bcbd35751b6d6205427baca27349272
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4764
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Type III-A CRISPR-Cas RNA targeting inhibits a nucleus forming jumbophage Malone,L.M. and Fineran,P.C. 2019-09-25 — GenBank