Protein

View in Explore
Genbank accession
WYW04296.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATTTKTVKTYALNGSLKDFTIPFEYLARKFVVVTLIGATRTELVLNSGFRFTTPTQITTTVAWGPGQNYDLIEIRRYTSATERLVDFADGSILRAYDLNTSQVQSLHIAEEARDLTADTIGVNNDGFLDARARKIVNLADGTEPGDAVNLRQQQQWGGSALNQALASAASATASAGSAAASQASNVASDAARAAAVVARTGAEAAQGAAASSATNANAANQTAYEWANKAENQVVNSGQFSAFHWVQKALAWATNSQASATASAASAATGVTRVQEATAQVALAAGQVALATTEANRATTEADRAAAEADALGGMNDMASNIDSAATGAGNWLVTFKGAIKSITKMFATKFEATEDYPSAETSFASQHTNEAPFFVKKMTLVSGSEYRPIIKARMQISGHDESLSLGVLSYVGGAQDAVLHWGGPAGSSVGGPLMQLKRDGTAAAFPGSLSATAVYDNNNRVWSSGNFNPDNKLACVGAGVNGTRNQIAGQTYNLFSAANQVYVAGLEIRENGLVGSGGPSPGHPYNAPSITFHWGATNVQKLFMNAQAHLCWGNPANQYCLYSSDGNVHGSVYGGWITNYIYNTANDRAYAWAMDSGAAGVTAVNNWAGVGGYGFCRTGVTATYGVDVAGGNLTFGSTGANGGGVPGVWRSLGWAGGGNHTLFIRIA
Physico‐chemical
properties
protein length:669 AA
molecular weight: 69434,90660 Da
isoelectric point:6,08754
aromaticity:0,08819
hydropathy:-0,12182

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil DC_1197
DC_1263
ATT
1–245
DC_1263
WYW04296.1
1 669
Architecture
ATT
RBD
ATT 1-245 | RBD 585-669
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-Kompost-2
[NCBI] 		3132679 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW04296.1 [NCBI]
Genbank nucleotide accession
PP496475.1 [NCBI]
CDS location
range 36289 -> 38298
strand +
CDS
ATGGCTACTACCACCAAGACGGTGAAGACGTATGCGCTTAATGGTTCCCTCAAGGACTTCACGATTCCCTTCGAGTATCTCGCTCGGAAGTTCGTTGTCGTTACCTTGATTGGTGCCACCCGGACTGAGCTTGTTCTCAACTCGGGCTTCCGCTTCACCACACCGACCCAGATCACCACCACCGTTGCGTGGGGGCCAGGGCAGAACTATGACTTGATTGAGATCCGTCGATACACCTCCGCCACTGAGCGTCTGGTGGACTTCGCTGACGGTTCGATCCTGCGTGCCTACGACCTGAACACCTCGCAAGTGCAATCCCTGCATATCGCTGAGGAAGCCCGTGACTTGACCGCTGACACAATCGGCGTGAACAACGATGGGTTCCTCGACGCTCGTGCTCGAAAGATCGTGAACCTCGCTGACGGCACCGAACCGGGTGACGCTGTGAACCTGCGCCAACAACAACAATGGGGCGGCTCCGCGCTCAACCAAGCGCTGGCCTCTGCTGCCTCTGCGACTGCTTCCGCTGGCTCCGCTGCTGCCTCTCAGGCATCCAACGTGGCGAGTGATGCTGCTCGTGCTGCTGCTGTGGTCGCAAGGACTGGCGCTGAGGCTGCTCAAGGTGCTGCTGCTTCGTCGGCTACCAATGCCAACGCTGCCAACCAGACTGCCTACGAGTGGGCCAACAAGGCCGAGAACCAAGTGGTCAACTCTGGGCAATTCTCAGCGTTCCACTGGGTCCAGAAAGCTCTGGCTTGGGCGACCAACTCTCAGGCTTCCGCTACGGCTTCCGCTGCATCTGCCGCTACGGGCGTCACTCGGGTCCAAGAGGCCACCGCTCAGGTAGCTCTGGCTGCTGGTCAAGTCGCTCTGGCGACCACTGAGGCCAACCGTGCGACCACTGAGGCTGATCGTGCTGCTGCTGAGGCTGACGCCTTGGGTGGCATGAACGACATGGCTTCCAACATTGACTCTGCGGCCACTGGCGCGGGCAACTGGCTGGTCACCTTCAAGGGCGCCATTAAGAGCATCACTAAGATGTTCGCCACGAAGTTCGAGGCCACTGAGGATTATCCTTCGGCTGAGACATCGTTCGCCTCACAGCACACCAACGAGGCTCCATTCTTCGTCAAGAAGATGACCCTTGTGAGTGGCTCAGAGTACCGTCCGATTATCAAGGCGCGTATGCAGATCAGTGGTCACGATGAGTCGCTGTCGCTGGGTGTCCTCTCCTACGTGGGCGGTGCTCAGGATGCTGTTCTTCACTGGGGCGGTCCTGCTGGCTCAAGTGTCGGCGGTCCACTGATGCAACTCAAGCGTGACGGCACGGCTGCTGCCTTTCCCGGTAGCCTCTCGGCAACTGCTGTCTACGACAACAACAACCGTGTGTGGTCGAGCGGCAACTTCAACCCAGACAACAAGCTGGCTTGCGTGGGTGCTGGCGTCAACGGCACTCGTAACCAGATCGCTGGGCAGACCTACAACCTGTTCTCTGCTGCCAACCAAGTCTATGTGGCTGGTTTGGAGATCCGTGAGAACGGTCTCGTTGGTTCTGGTGGTCCTTCGCCGGGTCACCCTTACAACGCACCGAGCATCACCTTCCACTGGGGCGCCACCAACGTCCAGAAGCTGTTCATGAATGCCCAAGCGCACCTCTGCTGGGGCAACCCCGCAAACCAATACTGCCTCTACAGCTCTGACGGGAACGTCCATGGCTCTGTCTACGGTGGCTGGATCACTAACTACATCTACAACACCGCTAACGACCGTGCCTACGCATGGGCGATGGACTCTGGTGCTGCTGGCGTCACTGCGGTCAACAACTGGGCTGGTGTCGGTGGTTATGGCTTCTGCCGTACTGGCGTCACTGCGACCTATGGCGTGGACGTGGCTGGCGGCAACCTGACCTTCGGTTCCACTGGTGCAAACGGTGGTGGCGTTCCCGGCGTATGGCGCTCTCTTGGCTGGGCTGGTGGCGGTAACCACACCCTATTCATTCGTATCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a6f119f0f9ebaad33595bb8a565341af4e8cb455137b9ca6408af49b4dfa2b17
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6395
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank