Protein

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Genbank accession
GENB_e88a1cce678e [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANKVYKNGVVHDTIPSIYKNNWHRSVPWVFSNGAWHRAYDLGDENLLANSRMLNGTDIFCYSDGVVIGNVPPCYTVYNNSTNTGNNAFAISFNQDNENTKGYTFRTIDSRMFFQTRISLKAGKTYTASVMVKNNDLTLVHSGVLADIYMDNGDPIDNYLTFKTKFDNNPLIGDERTRIYSTFTAKKDCLIQFNFGVGVRYNTNGDFSFDSPMVTNTNILIDYQPTPHVLTNEAIILNRDAGFSTTGSLMVANKTHKVSGGLVIGDIATELVIASKNVGGISTGMGINLETNTFWVKTPDGVYHTKPLKRPLPRNNSIGVSVWFDVSNGFAQNIRLYVNGEVYARITDPYLSLDTGLNTVFGLNSNNITIEQFEIYMDGNSHLFNISNQGNGKLVSTDGKLVLDIVGDTIWWSTVAPKITKQPQVIYNAQVGDTVVIESDCDRFSTVQWKTSRGVEVGNSKNLEIEVTPTLDTSIFYYAIYKNSYGQVTTRSTRIQIS
Physico‐chemical
properties
protein length:498 AA
molecular weight: 55425,58880 Da
isoelectric point:6,25629
aromaticity:0,10843
hydropathy:-0,25522

Domains

Domains [InterPro]
DC_1300
ATT
1–44
DC_1300 G3DSA:2.60.120.260
G3DSA:2.60.120.260
STR
45–230
G3DSA:2.60.120.260
DC_0441
STR
214–498
DC_0441
GENB_e88a1cce678e
1 498
Architecture
ATT
STR
ATT 1-44 | STR 45-498
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_e88a1cce678e
1 498
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,0790
Central domain 232 430 200 0,2212
C-terminal 431 498 67 0,6817
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-430
C-terminal
431-498

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AsSzw2
[NCBI] 		2698916 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MN871441.1_CDS_[complement(51567..53063)] [NCBI]
Genbank nucleotide accession
MN871441.1 [NCBI]
CDS location
range 51567 -> 53063
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
e331c78cc532bc36d2d880b34d175109aa8b29666ea56a4ed67e75fe9ae7d4a8

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,6771
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50