Protein

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Genbank accession
QPB07608.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTQITKARTLTYDGEEVYVRTHIDVIDGFDKNLLLTPEEKQKLNSFSQDNLTVATSEKAGLMSAEDKKRLDKLKTNSNEYSTRLSNVSTNNTLIKQDINLWPSNQQTVNLNKSISSCNNGIILVWRLDESDDLYHYQYLPKSHVQLHRNAKVTEVISINSSGQTCTKTVVVSDQLIKGTDDNFRNNANKIRLHEILEY
Physico‐chemical
properties
protein length:198 AA
molecular weight: 22607,05100 Da
isoelectric point:6,51906
aromaticity:0,06061
hydropathy:-0,66212

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PhiSepi-HH1
[NCBI] 		2782524 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB07608.1 [NCBI]
Genbank nucleotide accession
MT880870.1 [NCBI]
CDS location
range 24082 -> 24678
strand +
CDS
ATGACTCAAATTACTAAAGCTAGAACATTAACTTATGATGGGGAAGAAGTTTATGTTAGAACACACATTGATGTTATTGATGGTTTCGATAAAAATTTACTTTTAACACCTGAAGAAAAACAAAAGTTAAATAGTTTTTCGCAAGACAATCTGACAGTAGCAACTTCAGAAAAAGCAGGTTTAATGTCAGCCGAAGATAAAAAACGTTTAGATAAATTAAAAACAAATTCAAATGAATACTCAACAAGGTTAAGCAATGTTTCAACAAATAATACTTTAATTAAACAAGATATTAATTTATGGCCAAGTAATCAACAGACGGTTAATTTAAACAAAAGTATTTCATCTTGTAATAACGGAATTATTTTAGTTTGGCGTTTAGATGAATCTGATGATTTATATCATTACCAATACTTACCTAAATCACATGTTCAATTGCATAGAAATGCAAAAGTGACTGAAGTCATATCTATAAATTCTTCTGGACAAACATGTACTAAAACTGTAGTGGTGAGTGATCAATTAATTAAGGGTACAGATGATAATTTTAGAAACAATGCTAATAAGATTCGATTACATGAAATTTTAGAATACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
73f77fe56dba485f671083495b6c88a119e599ddc52c19d202eabf3dff0e72b0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8165
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Distinct clonal lineages and within-host diversification shape invasive Staphylococcus epidermidis populations Both,A., Huang,J., Qi,M., Lausmann,C., Weisselberg,S., Buttner,H., Lezius,S., Failla,A.V., Christner,M., Stegger,M., Gehrke,T., Baig,S., Citak,M., Alawi,M., Aepfelbacher,M. and Rohde,H. 2021 33544760 GenBank