Protein

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Genbank accession
NP_052111.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVVFTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:801 AA
molecular weight: 89877,40540 Da
isoelectric point:5,97374
aromaticity:0,11610
hydropathy:-0,36692

Domains

Domains [InterPro]
IPR058003
TTP
1–801
IPR058003
NP_052111.1
1 801
Architecture
TTP
TTP 1-801
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
NP_052111.1
1 801
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9939
Central domain 143 341 200 0,0719
C-terminal 342 801 459 0,1663
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-341
C-terminal
342-801

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage phiYeO3-12
[NCBI] 		110457 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teetrevirus
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Yersinia enterocolitica (type O:3)
[NCBI] 		34051 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Yersinia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_052111.1 [NCBI]
Genbank nucleotide accession
NC_001271 [NCBI]
CDS location
range 23797 -> 26202
strand +
CDS
ATGGCTCTCATTAGTCAATCAATCAAGAACCTCAAGGGTGGTATCAGCCAACAGCCAGATATTCTCCGGTTCGCTGAACAAGGTAGCGTACAGATTAACGGTTGGTCTTCTGAGTCCGAGGGTCTCCAGAAGCGCCCACCGATGATTCACCTTAAGACCCTTGGCCCTGCTGGGTATGTGGGTGCGCAACCTTACGTGCATCTTATCAACCGTGATGAGTTCGAGCAGTATTTCGTTGTGTTCACTGGTGAAGACATTAAGGTGTTCGACCTCGATGGTAAGGAGTACCAAGTACGTGGAGACCGCTCATATGTTCGTACAGCTAACCCACGAGAAGACCTTCGGATGATAACTGTGGCTGATTATACCTTTGTGACTAACCGCAAGGTGGTTGTGCAGAGTAACGACCAATCGGTCAACCTTCCGGGCTTTAAAGACCAAGGCGATGCGCTGATTAATGTTCGTGGTGGACAATATGGGCGTAGACTCTCAATCGAGTTCAACGGGGCTGAGCGTGCTGCTGTTCAACTACCAGACGGCTCACAACCAGCACACGTCAATGAGGTTGACGGTCAGGCCATCGCTGAGAAGCTGGCGGCTCAGTTGCGGAATAACCTAGGGAACCCCAACAATGACCAAGACCCAAATAAGTGGCGGTTCAATGTTGGCCCCGGATTCATCCATATCCTTGCGCCAAATAACGATAACGTTTGGGGACTACAGACTAAGGATGGTTACGCAGACCAGCTAATCAACCCTGTTACCCACTACACTCAGTCGTTCCAGAAGCTGCCTATTAACGCGCCAGATGGGTACATTGTGAAGATTGTAGGTGACACCTCAAAGACTGCCGACCAGTATTACGTTAGGTTCGACCTCAACCGTAAGGTGTGGGTAGAAACAATTGGATGGAACACAAGGACTCACCTATATTACCACACGATGCCTTGGGCGCTGGTACGTGCTTCTGACGGGAACTTTGACTTCAAGGTACTTGAGTGGGGTGCTCGTACTGTGGGTGATGATACAACCAACCCATACCCATCGTTTACCGGACAGACAATCAACGATATTTTCTTCTTCCGTAACCGTTTAGGCTTCCTTAGTGGGGAGAACATCATCTTGTCTCGCACCTCGAAATACTTCAACTTCTTCCCGGCATCCGTGTCAAACTACTCCGACGATGACCCAATCGACGTTGCGGTTAGTCATAACCGGGTGTCAACCTTGAAGTATGCCGTTCCGTTCTCCGAAGAGTTGCTCCTGTGGTCTGACCAAGCGCAGTTCGTTCTGACAGCCTCTGGTATCCTTTCGAGTCGCTCCGTAGAGTTGAACCTTACGACTCAGTTCGACGTGCAAGACAGGGCGCGACCACACGGTGTAGGACGTAATGTATACTTTGCGTCACCTCGCGCTTCCTTCACATCCATTAACCGATACTATGCGGTACAGGATGTAAGCTCTGTGAAGAACGCAGAGGACATGACGGCTCACGTTCCGAACTACATACCGAATGGAGTATTCAGTATATCAGGTACAACCGCTGAGAACTTCGCGGCTATCCTTACGAGCGGAGCACCGAACCGAGTGTATATCTACAAGTTCCTCTACATTGACGAGGAAATCAGGCAGCAGTCATGGTCTCATTGGGACTTTGGAGACAACGTTACGGTGTTTGCAGCACAGGTGATAAACTCAACAATGACTGTATTGATGGGTAATGAACATGCTGTGTGGATGGGACGCTTACACTTCACGAAGAACTCCATAGACATTCCGGGAGAGCCTTACAGATTATACATCGACGCTAAGAGGAAATACACCATCCCTGCCGGGACGTATAATGATGATACCTACCAGACGTCCATAAGCCTCGCAACGATTTATGGGATGAACTTCACTAAGGGTAGAGTGTCTGTGGTCTTCCCTGATGGAAAGATTATAGAGGTAGACCAGCCAATCAACGGTTGGAGCAGTGACCCGGTGTTACGACTTGATGGGAACCAAGAGGGCCAAGTGGTTTACATTGGGTTCAACATCCCGTTCACTTATACGTTCTCGAAGTTCCTCATTAAGAAGACTGCTGAGGATGGCTCGACGGCTACCGAGGATATTGGTCGCTTACAGCTTCGGCGTGCGTGGGTAAACTATGAGGACTCTGGAGCGTTCACCATCCGTGTGAACAACCTGTCCCGTGAGTTCATCTACACAATGGCTGGTGCTCGCTTGGGTTCTGACAATCTGCGTGTTGGTAGGTCGAACATTGGCACAGGGCAGTACCGCTTCCCGGTGGTGGGTAATGCGCAGACGAACCTAGTAACCATCGAGTCCGATGCGTCTACCCCATTGAACATCATTGGGTGCGGCTGGGAGGGGAACTACCTTCGTCGTTCTTCGGGCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3aa704260a0ff0b23f15bd53d4c0b5d4f28446699a090790b5c4ba5a96a34959
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8983
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50