Protein

View in Explore
Genbank accession
XQO35301.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKAVGTMASMIHGVSEQEPHNRQPGKMWESINMFDSPTRGKVRRRGSVYMHHKALPSAVAEAVSTARNMEEYTFFIDGYEYSLIYRSTAGEGGKDYFAQLVSKDTSEFYDIVYENSTWVDNLIAGGVSAIAALGRYVYIAGNTTIPRATSTDVWDTPANYQKLAGWVREGAYSRKYTVQLTHVDGTKHEYSYTTKPSAYPELLDTTDIPFWKPGSDPQEPRPDYQKDVADRTNAYEGKRSAWIKEAAEDIVPANIAAKLAEVLVLGGVFAASMGGCVLVDDPNYNDIKLLDDGNGSLVSYAGKEVSDPQWVTLYHWAGKIIRVRPSGGGDKESYYLKAVPLDGGSGWTKVEWVEAAGVEHKIENVVSQLVIDRAGKTAYVAQNGEGLKSLAPQLGDHPIYKENAVGDGVTAPLPYFFGRKISCLTVFQDRLVVMADNMVNMSRSSDYLNFFRQTVLNIQDNDPIEVFAHGSEGDVIERAVMYDKSLVMFGRLRQYAVDGRTFFSPTNPALNVIGNYEGGTAAQPIATGNFLFFGKKAAERTGLHQMRPGDTPETTVVYEVSQELDTWLTGQPVQLMGMTQPDMVTFRTDASPSIWYLYKYADQDGVGRVLSSWGKFAYSEELGTVAGITHHDGEMLIVTLRSAGGKDYWFLDRLSLETKLSDRPHLDSQVDFDKETEWHKAQADKLYAAARKPSEYFLLGSPRVGADDFIEQAPGVESSLVVGSVSPAMFQITNPYMRDNQGMPILAAKLQLVSYSFHLADTGGFRAYVLRPDPQRTMWFEGRVIGHTSNVIGRQPVFSGTRSVSVGKESRACIVELRSEDWQPLRVTGAEWSGQSFMPRARGMY
Physico‐chemical
properties
protein length:846 AA
molecular weight: 93798,41610 Da
isoelectric point:5,52847
aromaticity:0,10757
hydropathy:-0,35106

Domains

Domains [InterPro]
DC_0058
STR
1–846
DC_0058
IPR058003
TTP
139–844
IPR058003
XQO35301.1
1 846
Architecture
STR
STR 1-846
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQO35301.1
1 846
Domain Start End Length (AA) Confidence
N-terminal 1 190 190 0,7712
Central domain 191 401 212 0,3084
C-terminal 402 846 444 0,3612
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-190
Central
191-401
C-terminal
402-846

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage vB_SmaS_YA1
[NCBI] 		3410946 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQO35301.1 [NCBI]
Genbank nucleotide accession
PV224507 [NCBI]
CDS location
range 14827 -> 17367
strand -
CDS
ATGGCGAAGGCAGTAGGCACGATGGCTTCGATGATCCACGGCGTGTCCGAACAGGAACCGCACAATCGTCAGCCCGGCAAGATGTGGGAGAGCATCAACATGTTCGACAGTCCGACTCGCGGCAAGGTCCGCCGTCGCGGCTCCGTCTACATGCACCACAAGGCGCTGCCGTCTGCCGTCGCGGAGGCTGTCAGCACCGCACGGAACATGGAGGAGTACACCTTCTTCATCGACGGCTACGAGTACAGCCTGATCTACCGCAGCACTGCGGGTGAGGGCGGCAAGGATTACTTCGCGCAGCTTGTGTCGAAGGACACCAGCGAGTTCTACGACATCGTGTACGAGAACAGCACGTGGGTGGACAACCTTATCGCCGGTGGCGTGTCCGCGATTGCGGCACTGGGCCGGTACGTGTACATCGCAGGCAACACCACGATCCCGCGTGCGACCTCTACGGACGTGTGGGATACTCCCGCTAACTACCAGAAGCTCGCAGGGTGGGTGCGTGAGGGTGCGTACAGCCGGAAGTACACGGTGCAGCTGACGCACGTGGACGGTACGAAGCACGAGTACAGCTACACTACCAAGCCCTCGGCGTATCCGGAACTGCTGGACACCACGGACATTCCATTCTGGAAGCCCGGAAGCGATCCGCAGGAGCCGCGCCCTGACTACCAGAAGGATGTGGCGGACCGTACCAACGCGTACGAGGGTAAGCGCTCCGCATGGATCAAAGAGGCGGCAGAGGACATCGTACCGGCGAACATCGCGGCGAAGCTTGCTGAGGTGCTCGTACTTGGCGGGGTCTTTGCGGCCAGTATGGGTGGCTGCGTGCTGGTGGACGATCCGAACTACAACGACATCAAGTTGCTGGACGACGGTAACGGATCGTTGGTGTCGTACGCAGGTAAGGAAGTGAGCGACCCGCAGTGGGTCACGCTGTACCACTGGGCAGGCAAGATCATCCGCGTGCGCCCGAGTGGCGGTGGCGATAAGGAGTCCTACTACCTCAAGGCTGTGCCGCTGGACGGTGGCTCGGGCTGGACCAAGGTGGAGTGGGTGGAAGCTGCCGGTGTCGAACACAAGATCGAGAACGTGGTGTCACAGCTGGTCATCGACCGGGCAGGCAAGACCGCGTACGTTGCACAGAACGGTGAGGGCTTGAAGTCCCTCGCGCCGCAGCTGGGCGATCATCCGATCTACAAGGAGAACGCTGTCGGTGACGGAGTGACCGCGCCGCTACCGTACTTCTTCGGTCGAAAGATCAGCTGCCTTACCGTGTTCCAAGATCGCCTTGTGGTGATGGCGGACAACATGGTGAACATGTCCCGCTCGTCGGACTACCTGAACTTCTTCCGACAGACCGTGCTGAACATTCAGGACAACGATCCCATCGAGGTGTTCGCGCATGGCTCCGAAGGCGACGTGATCGAGCGTGCCGTGATGTACGACAAGAGCCTCGTGATGTTCGGGCGACTGCGGCAGTACGCTGTGGATGGCCGCACGTTCTTCTCCCCGACGAACCCCGCACTGAACGTGATCGGGAACTACGAGGGTGGCACCGCTGCGCAGCCCATCGCTACCGGTAACTTCCTGTTCTTCGGGAAGAAGGCGGCAGAGCGCACGGGCCTGCACCAGATGCGTCCGGGTGACACTCCCGAGACGACTGTGGTTTACGAGGTGTCGCAGGAGTTGGATACGTGGCTGACTGGGCAACCGGTGCAGTTGATGGGAATGACGCAGCCGGACATGGTTACTTTCCGCACCGACGCGTCGCCGTCGATTTGGTACCTGTATAAGTACGCAGACCAAGACGGTGTTGGTCGAGTCCTGTCAAGCTGGGGCAAGTTCGCCTACAGCGAGGAACTCGGTACCGTTGCTGGTATCACCCATCACGACGGCGAGATGCTGATCGTAACGCTGCGGAGCGCAGGCGGTAAGGACTACTGGTTCCTAGACCGGCTCTCCCTTGAGACGAAGCTGTCGGATCGACCGCACCTTGACTCGCAGGTGGACTTCGACAAGGAGACTGAATGGCACAAGGCGCAGGCTGACAAGCTGTACGCAGCAGCCCGCAAGCCCTCGGAATACTTCCTGCTTGGTTCGCCACGCGTAGGTGCAGACGACTTCATCGAACAGGCACCCGGCGTCGAATCCAGTCTGGTTGTGGGTAGTGTGTCCCCGGCGATGTTCCAGATCACGAACCCGTACATGCGGGACAATCAGGGTATGCCTATCCTCGCCGCGAAGTTGCAGCTGGTTTCGTACAGCTTCCATCTGGCAGACACTGGCGGGTTCCGGGCTTACGTCCTGCGTCCCGATCCGCAGCGTACCATGTGGTTTGAGGGTCGGGTCATCGGGCACACGAGCAACGTCATCGGGCGTCAGCCTGTGTTCAGTGGCACGCGATCCGTGAGCGTAGGCAAGGAGTCCCGAGCCTGCATCGTTGAACTGCGGTCAGAGGATTGGCAGCCGCTCCGCGTCACTGGCGCTGAGTGGTCCGGTCAGTCCTTCATGCCGCGCGCACGAGGGATGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
be479f561388a3001d378aff26fa251aeeceac5dea6ad2167f3dc918d6ed6a2c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2965
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50