Protein

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Genbank accession
YP_009280279.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTTRISKTRALATIKSLEAKIRKATEQQLLIAVGEGKDKNQVVVGAAIEVDDLSTRIKTDFQSLLDMMSQRDRIKAALIKSNAETIVEIGSRRMTVAEAIEAKRSMELKAQLLANMRKQFHAATVKFNTQKAQFDAKYERLQDSMATRDKKTSEDEVKMQLNLLELKNTPFLIDPLELEKLIKQHDEEYQDFATNVDFVLSESNASTFIEVE
Physico‐chemical
properties
protein length:212 AA
molecular weight: 24069,35410 Da
isoelectric point:6,23895
aromaticity:0,04717
hydropathy:-0,44057

Domains

Domains [InterPro]
DC_0027
STR
1–212
DC_0027
Coil
Unmapped
7–27
Coil
YP_009280279.1
1 212
Architecture
STR
STR 1-212
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SHSML-45
[NCBI] 		1863010 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus SHSML45
Host Shigella sonnei
[NCBI] 		624 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009280279.1 [NCBI]
Genbank nucleotide accession
NC_031022.1 [NCBI]
CDS location
range 64708 -> 65346
strand -
CDS
ATGACCACTCGTATTTCTAAAACTCGTGCTCTGGCAACCATCAAATCTCTGGAAGCTAAAATCCGTAAAGCTACTGAACAACAGCTTTTGATCGCTGTTGGTGAAGGTAAGGATAAAAACCAGGTTGTAGTTGGCGCTGCAATCGAAGTAGATGACCTGTCTACTCGTATTAAGACTGATTTCCAGTCTCTGCTGGATATGATGTCCCAGCGTGATCGTATCAAAGCTGCCCTGATTAAGAGCAACGCAGAAACGATCGTTGAGATCGGTTCTCGTAGAATGACTGTTGCAGAAGCAATTGAAGCTAAGCGTTCTATGGAGCTTAAAGCTCAGTTGCTGGCTAATATGCGTAAGCAGTTCCATGCCGCTACAGTTAAGTTTAATACGCAGAAAGCACAGTTTGATGCTAAATATGAGCGTTTGCAGGATAGCATGGCTACCCGCGATAAGAAAACTTCCGAAGATGAAGTTAAAATGCAGCTCAACCTGCTGGAACTCAAGAATACTCCATTCTTGATTGATCCGCTGGAACTGGAGAAGCTGATTAAGCAGCATGACGAGGAATACCAGGACTTTGCAACAAATGTTGACTTTGTTCTGTCCGAGTCTAACGCCTCTACCTTCATTGAAGTAGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ebf604f55499730fb7e56ef50337f20588c5ef2c7648e2d90c41c4e0a9dfc841
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9216
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic Characterization of ShigActive phages Das,C.R., Woolston,J., Li,M., Sulakvelidze,A. and Soffer,N. 2013-11-08 — GenBank