Protein

View in Explore
Genbank accession
AUR88280.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSSINYRTKVTELGLNKIRNAALLGSTLNIKNVKIGDSTGYEYEPTGLEVDLKNTVYESAPNSVTEIKNINSIVNVELIVPSESGPFWVREVGVFDSEGDLIFIAAIPPRFKTNQPNVNIDMTVNVMIDVQDSEVVNFIVDPNKTIASHKHVESEIRKRTGCYKVGNISDYVGQSLPEADKLNAYQYPGGSGDWYMPEQGQSFPITIPADPSSDNGWALVGALMKGSAGVGLVTSTGSTTPRTLADRFAEVVNAKDYFLATDPAGDQSAMLQRAANSAITQGKPLYIPSGEYHQYTAINPNDAKSYNSLEIYGDGSGNPYGEDIYTGGTRIITHDCDFVLIDLVFPNDSINLHDFSVYGGGENKTNKLGFVLNLQGDRKASSLFIDNVNFGHNGGLFNYESNSIANSPYTWISRCYSWQTRKLVNLGANVGATIFNIARCLFHRTIESAITPAIGMELSVSDSWFEGVAPHVFEKTSNNFFLLNLDNVFFENKDAATDDSISVFNVGANTEINISGKTNLPGAFYTNKASVLGSGVTVSNFTNKTVRFGLENAIVMTPQTISPDDQLEVNVFHTPLNKASYSDTGDSLINKTPFGGAAPLYVKDSVDMPAGLKRIYGPCGDSDRPVFGDTDTPVSGDGFVSASFIYESSGSVQGFQQAYITIDGVNRPAPLGFLFPTDSDTVPYVCSVSTSVTAANAIDGVRLWLYDKERYLAGGTFKFSEEVVCSSMMPFKSRQRTVKTNIPSGASEDVILSVAGIDLPFYYKSTSKINDGAGGIVQYDVAGTSRLADIIEVLDNQKVSSDFTSSAGQQGNIGVVKISLTNNSGSAATVETNWEF
Physico‐chemical
properties
protein length:836 AA
molecular weight: 90306,57170 Da
isoelectric point:4,72528
aromaticity:0,09809
hydropathy:-0,18804

Domains

Domains [InterPro]
DC_1371
STR
1–382
DC_1371
IPR022225
ATT
5–149
IPR022225 IPR012334
IPR011050
STR
249–500
IPR011050
IPR024535
ENZ
252–319
IPR024535
AUR88280.1
1 836
Architecture
ATT
STR
ATT 1-149 | STR 150-578 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR88280.1
1 836
Domain Start End Length (AA) Confidence
N-terminal 1 267 267 0,9952
Central domain 268 571 305 0,9858
C-terminal 572 836 264 0,9491
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-267
Central
268-571
C-terminal
572-836

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.111.B._10N.286.45.E6
[NCBI] 		1881329 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR88280.1 [NCBI]
Genbank nucleotide accession
MG592485.1 [NCBI]
CDS location
range 13949 -> 16459
strand +
CDS
ATGAGCTCGATTAATTACAGAACTAAAGTAACAGAACTTGGATTGAACAAGATTAGAAATGCCGCCCTATTGGGCTCTACGCTAAACATTAAAAACGTTAAGATTGGAGATTCAACAGGCTACGAATACGAGCCGACGGGGTTAGAGGTTGATCTTAAAAATACCGTTTACGAATCAGCGCCAAACTCAGTAACTGAAATTAAAAACATTAACTCGATAGTGAATGTTGAGCTTATTGTGCCTAGCGAGTCCGGCCCTTTCTGGGTTCGTGAAGTTGGCGTATTCGATAGTGAAGGTGATCTTATTTTTATCGCGGCAATTCCGCCAAGATTTAAAACTAACCAGCCGAATGTAAATATCGATATGACGGTAAACGTTATGATTGATGTTCAGGATTCTGAGGTCGTTAATTTTATTGTCGATCCAAACAAAACCATCGCCTCACATAAACATGTCGAGAGCGAAATCAGAAAAAGAACAGGATGTTACAAGGTTGGTAATATTTCAGATTACGTAGGGCAATCACTACCAGAGGCCGATAAGCTTAACGCATACCAATACCCTGGTGGTTCTGGTGATTGGTACATGCCGGAGCAAGGCCAATCATTCCCAATCACAATCCCTGCCGATCCATCAAGTGATAATGGGTGGGCTCTGGTTGGCGCTTTGATGAAGGGAAGTGCAGGGGTTGGGCTTGTTACATCTACAGGGTCTACCACTCCGCGCACCCTAGCAGATCGTTTTGCTGAGGTGGTGAATGCAAAAGATTATTTTCTCGCAACAGACCCGGCCGGAGACCAGTCTGCAATGCTTCAGCGCGCCGCCAACTCCGCCATAACTCAAGGAAAGCCGCTATACATTCCGTCTGGTGAGTATCATCAATATACCGCAATAAACCCAAACGACGCTAAATCTTATAACTCTCTTGAGATTTATGGTGACGGGTCTGGAAACCCATACGGTGAGGATATTTACACGGGCGGTACAAGGATAATTACTCATGACTGTGATTTTGTATTAATTGATTTAGTATTTCCTAACGACAGTATAAACCTGCATGATTTTTCAGTTTACGGCGGCGGTGAAAATAAAACAAACAAGCTCGGGTTTGTTCTTAACTTGCAAGGAGACAGAAAGGCATCGTCGCTTTTTATCGATAATGTCAACTTCGGTCATAACGGTGGGTTGTTTAACTATGAGTCTAATTCGATAGCAAATAGCCCGTACACCTGGATATCAAGGTGCTACTCATGGCAGACAAGAAAGCTGGTAAATCTTGGCGCTAACGTCGGGGCTACTATATTTAATATTGCGAGATGTTTATTCCACAGAACAATAGAAAGCGCAATAACTCCGGCGATTGGGATGGAGCTCAGTGTTAGTGATTCTTGGTTTGAGGGGGTTGCTCCTCATGTGTTTGAAAAAACGTCAAATAACTTCTTTTTGTTGAATCTCGATAATGTGTTCTTCGAAAATAAAGACGCTGCAACCGATGATTCCATTAGCGTTTTCAATGTTGGAGCCAACACCGAGATAAACATCTCGGGTAAAACAAATTTACCAGGTGCGTTTTACACAAACAAAGCTAGTGTTTTAGGTTCAGGGGTTACTGTTTCAAATTTCACAAATAAAACTGTCAGATTTGGGCTAGAAAACGCAATAGTAATGACGCCTCAAACAATATCGCCAGACGACCAGTTAGAGGTTAACGTATTTCACACCCCGCTTAACAAAGCTAGTTATTCCGACACTGGTGATAGCCTGATAAATAAAACCCCATTCGGAGGTGCTGCACCTTTGTACGTCAAGGACTCCGTTGATATGCCTGCTGGTCTAAAAAGAATCTATGGCCCTTGCGGTGATAGTGATAGGCCTGTCTTTGGGGATACAGATACACCGGTGAGTGGTGACGGCTTTGTTTCTGCAAGCTTTATTTATGAGTCTTCGGGCTCCGTGCAGGGCTTTCAGCAGGCTTACATAACTATTGACGGGGTTAACCGGCCGGCTCCTCTCGGATTTCTTTTTCCGACAGATTCCGATACAGTTCCTTATGTATGCTCAGTGTCAACAAGCGTTACCGCCGCCAACGCCATAGACGGGGTTAGACTATGGCTGTACGACAAGGAGAGATATTTAGCAGGGGGCACGTTTAAATTCTCAGAAGAGGTGGTTTGCTCCTCCATGATGCCTTTCAAATCGAGACAGCGAACTGTAAAAACAAACATACCTTCCGGAGCGTCAGAAGATGTAATCCTATCCGTTGCGGGCATTGATTTGCCTTTTTACTACAAGTCAACATCAAAGATAAATGACGGCGCTGGCGGTATCGTTCAATATGACGTTGCGGGAACCTCTAGGCTTGCGGATATTATTGAGGTTTTAGATAATCAAAAAGTATCATCAGACTTCACATCCTCAGCGGGACAGCAAGGAAACATTGGAGTTGTAAAGATAAGCCTAACTAACAACTCCGGGAGCGCCGCCACTGTTGAGACTAATTGGGAGTTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d6acbc9f8119c5f69b762a693a225782bef3d1c9f41b5bb15e7a61efa9269436
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6058
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank