Protein

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Genbank accession
YP_009791873.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
METKLSLVNHLLQVVGERRVTTLETGHPSVIQAIQALESMNRDFQGKGWWFNTNRDVRLVPNNLGEVLLPSEALAFSITRHQLDYMQPANKQQYVKRGKRLYDAWNNTYTINRTLMADLVIEIEIEDLPQIAATYLKHWSAETYYVDDDGDIQKSDRLAQRTMLAFHALKAEQMRVMSINALDSPAAQNLRYRIGNPGLAHRAQFLGGRIT
Physico‐chemical
properties
protein length:211 AA
molecular weight: 24167,25510 Da
isoelectric point:7,98868
aromaticity:0,08057
hydropathy:-0,40853

Domains

Domains [InterPro]
DC_2080
ATT
1–75
DC_2080 DC_1286
IPR033767
TTP
5–144
IPR033767
YP_009791873.1
1 211
Architecture
ATT
TTP
RBD
ATT 1-75 | TTP 76-144 | RBD 145-210 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Agrobacterium phage Atu_ph03
[NCBI] 		2024262 Uroviricota > Caudoviricetes > Autographivirales > Atuphduovirus > Atuphduovirus atuph03
Host Agrobacterium tumefaciens
[NCBI] 		358 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009791873.1 [NCBI]
Genbank nucleotide accession
NC_047846 [NCBI]
CDS location
range 22308 -> 22943
strand +
CDS
ATGGAAACTAAACTCAGTCTCGTCAATCATCTACTACAGGTGGTGGGCGAGCGACGCGTGACGACGCTTGAGACAGGCCACCCGTCTGTTATTCAGGCTATTCAGGCGCTTGAGAGTATGAACAGGGACTTTCAGGGTAAGGGGTGGTGGTTCAATACCAACCGGGATGTTCGGCTCGTTCCTAACAACCTTGGTGAAGTGCTGCTGCCCTCTGAGGCACTGGCATTCAGCATTACTCGGCACCAGCTTGACTACATGCAGCCTGCTAACAAGCAGCAGTATGTGAAGCGTGGTAAGCGGTTGTACGACGCGTGGAACAACACGTACACAATCAATCGCACGCTGATGGCTGACCTCGTTATCGAAATCGAGATCGAGGACTTACCGCAGATCGCCGCCACGTACTTGAAGCACTGGTCTGCTGAGACGTACTACGTTGATGACGATGGTGATATCCAGAAGTCGGATCGGTTGGCACAGCGAACCATGCTTGCGTTCCACGCACTCAAGGCGGAACAGATGCGTGTTATGAGCATCAATGCTCTGGACAGTCCGGCAGCACAGAACCTACGCTACCGCATCGGTAATCCGGGTCTTGCGCATAGGGCACAATTCTTAGGTGGAAGGATTACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
92e67c34ffa0eb27a1698f7043d57b835b941c44af21073167564456c36de86c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8908
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50