Protein

View in Explore
Genbank accession
XYR95715.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TSP
Evidence RBPdetect2
Probability 0,85
Protein sequence
MSNILTNNINPRSGNKITIGGVNDTVSISGTVTYEDVTSVDSVGVITARQGVVIGTGASIGNPANNELGLYTNSSERVRIDSSGRIGIGVSTPDREFHVESSLADTQYQPVARFETSSTGDFGPAIELTGNRNSNVSTAWIGIDSVSAGGSNLVYASDGSHRWLGNDKASERMRIDTSGRLLVGTATARSNFFNSTESSQVLIEGTNTSTANLAIIRNSNNTGYSILSLAKTRGTVVGSTTVVQSGDAVGGIEFQGSDGTEFVQAASIRGEVDGTPGANDMPGRLVFSTTADSDNSPTERMRIMSNGRLLSFTSSTDGHGFRSSQAASTSHILIGGLRDASSTTSGTFVFLVRTNGQVENAANSYGPISSDERLKQDIVDANSQWSDIKNVRITNFHYKNDPAGTLHLGPIAQELETVSPGLITRRPASEEEIADTTNNLVEGDEVLSFKASILYMKAVKALQEAMERIETLEAQVAELQGN
Physico‐chemical
properties
protein length:482 AA
molecular weight: 50923,29320 Da
isoelectric point:4,85743
aromaticity:0,05187
hydropathy:-0,30498

Domains

Domains [InterPro]
DC_1386
STR
2–209
DC_1386 IPR030392
DC_1367
RBD
188–482
DC_1367
IPR030392
CHP
370–421
IPR030392 Coil
XYR95715.1
1 482
Architecture
STR
RBD
STR 2-209 | RBD 210-482
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR95715.1
1 482
Domain Start End Length (AA) Confidence
N-terminal 1 24 24 0,1376
Central domain 25 223 200 0,1488
C-terminal 224 482 258 0,9834
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-24
Central
25-223
C-terminal
224-482

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage RN05-S
[NCBI] 		3412547 Viruses >
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR95715.1 [NCBI]
Genbank nucleotide accession
PV261924.1 [NCBI]
CDS location
range 153640 -> 155088
strand -
CDS
ATGTCAAATATTCTCACTAATAATATTAACCCTAGAAGTGGTAATAAGATTACTATTGGTGGGGTAAATGACACTGTATCCATTTCAGGTACAGTCACTTATGAAGATGTCACCAGTGTAGATTCTGTTGGTGTCATTACTGCTAGACAAGGTGTAGTAATTGGTACAGGGGCATCTATTGGTAATCCTGCTAATAATGAGTTAGGTTTATATACAAATTCTTCAGAACGTGTACGTATTGACAGCTCGGGCCGCATAGGAATAGGGGTTTCTACCCCAGATAGAGAATTTCATGTTGAGTCATCTTTAGCGGACACACAATATCAACCCGTAGCTCGTTTTGAAACTTCTAGTACGGGAGATTTTGGACCTGCAATTGAATTAACTGGCAATAGAAATTCCAACGTGTCCACAGCATGGATCGGGATAGATAGTGTCTCAGCTGGTGGTAGTAATCTTGTATATGCCTCTGATGGTTCGCATCGTTGGTTGGGCAACGATAAAGCCTCTGAGAGAATGCGCATCGATACCAGCGGCAGGCTGTTGGTTGGTACGGCTACTGCGCGTAGCAATTTCTTCAACTCGACCGAATCCAGTCAAGTTCTGATCGAAGGAACAAATACAAGCACTGCTAACCTGGCAATTATTAGAAATAGCAATAATACTGGATACTCAATTTTATCTCTTGCAAAAACTCGTGGAACCGTTGTGGGTTCCACAACTGTTGTGCAATCAGGAGATGCTGTTGGCGGTATCGAGTTCCAGGGCTCTGACGGCACTGAGTTTGTCCAGGCAGCAAGCATTCGTGGTGAAGTAGACGGCACACCTGGCGCTAATGACATGCCAGGCCGCCTAGTATTTTCCACCACCGCCGACAGTGACAACAGCCCGACTGAGCGGATGAGGATTATGAGTAATGGAAGACTACTAAGCTTTACTAGTTCAACTGACGGTCACGGGTTTAGAAGTTCTCAAGCAGCCAGCACCAGTCACATTCTTATTGGCGGGCTACGAGATGCAAGCAGCACGACCAGCGGCACTTTTGTGTTTTTAGTCCGAACTAATGGACAAGTTGAAAATGCGGCTAATAGTTATGGTCCAATTAGTTCCGACGAACGCTTAAAGCAGGACATCGTTGATGCTAATTCTCAATGGAGTGACATTAAAAACGTCCGCATCACCAACTTCCATTACAAAAATGATCCTGCAGGTACGTTACATTTAGGCCCGATTGCACAGGAACTTGAAACCGTTAGTCCTGGACTTATTACACGTCGTCCTGCTTCCGAGGAAGAAATTGCTGATACTACTAACAATTTAGTAGAAGGAGATGAGGTGTTGAGTTTTAAGGCATCCATCCTTTACATGAAAGCAGTTAAAGCCCTCCAAGAAGCAATGGAGCGCATCGAAACCCTTGAAGCTCAAGTTGCAGAACTTCAAGGTAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
12b7edd638a664742ed18a902976c519a646abf3d62b12b2f9181d6fc16d3949
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7055
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50