Protein

View in Explore
Genbank accession
XWX31433.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MGIYIINKEEIVLHLDGNEILGYTLEGGYDPSSINNALLKRSQLPENFFNEFSSGRFAYYRDTDKVEYNPDYVPVKRNVEDDDDEDSYSSVPNGYVPRKDYEELKSQLDEIKKTQEQTLELLKQLLGQKG
Physico‐chemical
properties
protein length:130 AA
molecular weight: 15050,41930 Da
isoelectric point:4,48581
aromaticity:0,10769
hydropathy:-0,87385

Domains

Domains [InterPro]
DC_0295
STR
3–130
DC_0295
IPR021358
STR
16–74
IPR021358 Coil
XWX31433.1
1 130
Architecture
STR
STR 3-130
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_1
[NCBI] 		2815605 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus epidermidis
[NCBI] 		1282 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX31433.1 [NCBI]
Genbank nucleotide accession
MZ417323.1 [NCBI]
CDS location
range 98537 -> 98929
strand -
CDS
ATGGGAATATACATTATTAACAAAGAAGAGATTGTATTACATTTAGATGGCAACGAAATTTTAGGATATACATTAGAAGGTGGGTATGACCCTTCAAGTATTAATAATGCTCTTTTAAAACGAAGTCAATTACCAGAAAACTTCTTTAATGAATTCTCTTCAGGCAGGTTTGCATATTATAGAGATACAGATAAGGTAGAGTATAACCCTGATTATGTTCCAGTAAAAAGAAATGTAGAAGATGATGATGACGAGGACTCTTATAGTTCAGTACCTAATGGTTATGTTCCTAGAAAAGATTATGAAGAGTTAAAAAGTCAATTAGATGAGATTAAGAAAACACAAGAACAAACATTAGAGTTATTAAAACAATTATTAGGACAGAAAGGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
59f9b52fd8eb9ee7426238964614080d307a0d9a86e3cf46660d4266bc3cba4c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6857
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank