Protein

View in Explore
Genbank accession
XNO92057.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,67
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTKGAVVASSDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKTFDFESLQNLANQVKADSQSAGASATAAAASETAAKTSETNAKASENKAKTSETNAKASETAAKTSETNAKASETAAKTSETNAKSSENNAKTSETNAKASETAAKTSETNAKASETAAKTSETNAKSSENKAKTSETNAKASETAANSAKTDAQTAKGQTQNLRDQVVDLVAGVQAPDKLPGCGNGRYWMKIANIKRVSSYYCFLQFIVGGGSDQGNVNLPVDIFSLSGRGLPSSLTSDNIDTWFTQRSLVAAKSSTSRIKLGVVQYEDGSFDVYFYAPSGYIPQMWLNRLNVQANNGSITGPIIDRTGYSWITTEPSGIVYNSPSDYLMANDNTIPRTNVANTFSQPQAISVPGGNATLTLNGCTVRANNSDVLVLSTPSGSKGMMFRPNGDTSVNGQVTISGNGDVLVNGAVKSKGVDVTASQNLPLNETTATTGVGVNFIGNHTTECSFGIENTAGGSAVFHNYTRGASNSVTKNNQLLGGYGSRPWLGSDYTEHSNAALHFLGAGDASGTNHGGWIRLLVTPKGKTISDRVPAFRLSDNGDLWIVPDGAMHSDLGLVRSFETLNAAVPKFNGPTNQDGRGLKIVSSDGAPEINMIAPRGTNNSSPAVRAMWCDGSLGNSAKYVGAAQAWSNFFLGASGHDGEKFDSMRGAVNIQATEGWGKTSTPTRILFETCAAGSTARTARWCVDHNGNFVPMGDGGYDIGWGSGRVNNIYAKNGAINTSDGRMKNDVRAMSDPETEAAKAIAKEIGFWTWKEQADMNDVREHCGLTVQRAIEIMESFGLEPFKYGFICYDKWDEQTVVSEYGPANEDGSENPIYKTIPAGDRYSFRIDELNMFIAKGFEARLSALEDKLGM
Physico‐chemical
properties
protein length:971 AA
molecular weight: 103008,90460 Da
isoelectric point:5,47174
aromaticity:0,07518
hydropathy:-0,38527

Domains

Domains [InterPro]
DC_0313
STR
1–969
DC_0313
IPR036388
RBD
825–970
IPR036388
IPR030392
CHP
839–969
IPR030392
IPR030392
CHP
839–898
IPR030392
cd10144
CHP
839–961
cd10144
XNO92057.1
1 971
Architecture
STR
STR 1-970 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNO92057.1
1 971
Domain Start End Length (AA) Confidence
N-terminal 1 284 284 0,7423
Central domain 285 483 200 0,7175
C-terminal 484 971 487 0,8602
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-284
Central
285-483
C-terminal
484-971

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Roth08
[NCBI] 		3384107 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNO92057.1 [NCBI]
Genbank nucleotide accession
PQ657787.1 [NCBI]
CDS location
range 28922 -> 31837
strand -
CDS
ATGGCACTATACAGAGAAGGTAAGGCGGCTATGGCCGCAGACGGAACTGTTACCGGGACTGGCACAAAATGGCAATCTTCGCTTTCGCTGATTCGCCCCGGCGCGACGATTATGTTTTTGTCGTCACCGATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCCATCACCACAAAAGGCGCTGTCGTAGCGTCTAGCGATTACGCGATCCTGTTAAGTGACTCGCTAACCGTTGACGGCCTGGCGCAAGATGTTGCGGAAACGCTGCGCTACTACCAGTCGCAGGAAACTGTAATTGCGGATGCAGTCGAGTTCTTTAAGACGTTTGATTTTGAGTCGCTGCAAAACCTTGCCAACCAGGTAAAGGCGGATTCACAATCCGCAGGTGCAAGCGCTACGGCTGCGGCGGCATCTGAAACCGCTGCAAAGACTTCAGAGACCAACGCAAAAGCATCTGAAAATAAGGCGAAGACCTCGGAGACAAATGCAAAGGCATCCGAAACAGCCGCAAAGACTTCAGAGACCAATGCAAAGGCATCAGAAACCGCAGCGAAGACCTCGGAGACGAACGCTAAATCTTCGGAAAATAATGCCAAAACTTCAGAGACCAATGCAAAGGCATCAGAAACCGCCGCTAAAACCTCGGAGACAAATGCAAAGGCATCTGAAACCGCAGCGAAGACCTCAGAGACGAACGCTAAATCTTCGGAAAATAAAGCGAAAACCTCGGAGACCAATGCAAAAGCATCCGAAACTGCTGCTAACTCTGCGAAGACCGACGCGCAAACTGCGAAGGGGCAGACGCAAAATCTTCGTGATCAGGTTGTCGATCTTGTGGCTGGCGTGCAAGCGCCCGATAAACTTCCTGGATGCGGTAATGGACGCTACTGGATGAAGATTGCTAATATTAAACGCGTTAGTTCGTATTACTGTTTTCTTCAGTTTATCGTTGGCGGTGGTTCTGACCAAGGTAATGTAAACTTACCCGTTGATATTTTCTCCCTGTCAGGGCGAGGTCTTCCATCATCGTTGACAAGCGATAATATTGACACTTGGTTTACGCAGCGCTCTTTAGTTGCGGCAAAGTCAAGCACAAGTCGAATTAAACTTGGGGTGGTTCAATATGAAGACGGTTCATTTGATGTTTATTTTTACGCCCCTTCTGGGTACATCCCCCAAATGTGGTTAAATCGCTTGAACGTACAGGCTAACAATGGGTCGATTACCGGGCCGATCATCGATCGCACTGGTTATTCGTGGATTACAACGGAGCCATCCGGGATTGTATATAATTCACCATCTGATTATTTGATGGCTAACGATAACACGATCCCGCGAACCAACGTGGCCAACACGTTTAGCCAGCCGCAGGCGATCAGCGTGCCGGGCGGAAACGCCACGCTGACCCTGAACGGTTGCACTGTTAGGGCAAATAACAGTGATGTGCTTGTGCTTTCAACTCCTTCTGGTAGCAAAGGTATGATGTTCCGCCCCAATGGCGACACTTCTGTAAATGGCCAGGTGACCATTTCGGGAAATGGTGATGTTCTTGTTAATGGCGCTGTAAAAAGCAAAGGCGTTGATGTTACCGCATCGCAGAATCTGCCGTTGAATGAGACAACCGCGACAACCGGGGTTGGCGTTAACTTTATCGGCAACCACACGACTGAGTGTTCTTTTGGGATTGAAAATACGGCTGGCGGATCTGCTGTGTTCCATAACTATACGCGCGGCGCATCTAACAGCGTGACGAAGAACAACCAGCTTTTAGGTGGTTATGGTTCTCGCCCGTGGTTAGGATCTGACTATACGGAGCACAGTAACGCGGCCTTGCATTTCCTTGGGGCTGGCGATGCATCTGGAACCAATCACGGTGGCTGGATTCGATTGCTTGTCACCCCCAAAGGTAAGACGATTAGCGATAGGGTTCCGGCGTTCAGGCTGTCAGATAACGGAGATCTCTGGATTGTTCCGGATGGGGCCATGCACTCAGATCTTGGGTTGGTGCGTAGCTTTGAAACGTTAAATGCAGCAGTTCCAAAATTCAATGGCCCCACCAATCAGGATGGTCGAGGATTGAAGATTGTATCATCGGATGGTGCGCCTGAAATTAACATGATTGCGCCTCGCGGAACTAATAATTCATCTCCTGCGGTTCGTGCAATGTGGTGCGATGGTAGTTTAGGGAACTCGGCAAAATATGTTGGCGCTGCACAGGCATGGTCTAATTTCTTCCTTGGGGCGTCGGGCCACGATGGGGAAAAATTCGACTCAATGCGCGGCGCGGTTAACATTCAGGCTACGGAGGGGTGGGGGAAAACCAGCACGCCAACGCGAATTTTGTTCGAAACATGCGCGGCAGGCTCAACTGCGCGAACCGCTCGCTGGTGCGTTGACCACAACGGGAACTTCGTACCGATGGGCGATGGCGGTTATGATATCGGATGGGGTAGCGGTCGAGTCAATAACATCTACGCTAAAAATGGGGCAATCAACACCTCAGACGGTCGGATGAAGAACGACGTTCGAGCCATGAGCGATCCTGAAACCGAAGCGGCCAAAGCCATTGCGAAGGAGATCGGGTTCTGGACATGGAAGGAGCAAGCCGATATGAACGACGTTCGTGAGCACTGCGGCCTGACCGTTCAGCGGGCGATCGAGATCATGGAAAGTTTTGGGCTTGAGCCGTTCAAATATGGCTTCATCTGTTATGACAAGTGGGATGAGCAAACGGTGGTTTCAGAATATGGGCCAGCGAATGAAGACGGGTCGGAAAACCCGATCTACAAAACCATCCCGGCTGGTGATCGCTACTCGTTCCGCATTGATGAGTTAAACATGTTTATCGCAAAAGGATTTGAAGCGCGGTTATCCGCACTTGAGGATAAATTAGGGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
12e54150626c6852fc6dcdacce603884b16c87a976c07fc9c8fd03378d4de6bc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6078
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank