Protein

View in Explore
Genbank accession
QDH46725.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSTSRNFGKVPGNAYKPGFIDTESPEMMKMSVDRELGEISKAFYKTDETVATKENSIYKGKWNPSSGAYPDANYENSWWDVETPNDNDYSFDGKVWRSFQKLIYDKSTLSYRLVEDWASATVKERIEKLEVSSGDTTAAIQELERVMIAEDAALAERITNLSTHVDTQNAVLDAKIEDYNTVQSNATSALANKVTTVETEYKAADATLTSSIQNEATARSTADSALATQISTVDANYKAADVVINASITSEATARANGDSALASQITTVKSELEGDIAAVQTYATTNINRIDNEVNAVEAKWGVRVNVNNKITGIQLNNNGNQTSFAVQADQFIISDGTNNNGAPFEVVGGITKIKNAAVGTIASDNWNGSNVGWAITKDGYANFQNVIVRGNLSADTFTGVGGSGNTFPCVSRSKVTTGQVITLETFSISQALQQNSFILVNRPMVVLFGFGRVFLRLRRKDTNAIVASGYGMNYLSNINDGVSVTISLSGTLPAGYSGQLELEGYMDNSHGLGSGAWQADGGSNGDWTVYRAV
Physico‐chemical
properties
protein length:535 AA
molecular weight: 57613,88170 Da
isoelectric point:4,74790
aromaticity:0,08224
hydropathy:-0,32411

Domains

Domains [InterPro]
DC_2230
STR
13–211
DC_2230 IPR053171
DC_0292
STR
204–433
DC_0292
IPR015406
RBD
291–396
IPR015406
DC_2165
RBD
395–535
DC_2165
QDH46725.1
1 535
Architecture
STR
RBD
STR 13-433 | RBD 434-535
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage LAh_8
[NCBI] 		2591032 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH46725.1 [NCBI]
Genbank nucleotide accession
MK838114.1 [NCBI]
CDS location
range 56040 -> 57647
strand +
CDS
ATGAGTACAAGTAGAAATTTTGGAAAGGTTCCTGGGAATGCTTACAAACCTGGTTTTATAGATACCGAATCCCCAGAAATGATGAAGATGAGTGTTGACAGGGAACTTGGTGAAATATCAAAAGCTTTCTATAAAACAGATGAAACTGTAGCTACTAAAGAGAATTCGATCTATAAAGGTAAGTGGAACCCCTCCAGCGGAGCCTATCCAGATGCCAATTATGAGAACTCTTGGTGGGATGTTGAAACACCTAACGACAACGATTACAGTTTTGATGGTAAAGTCTGGAGAAGCTTCCAGAAACTTATCTACGATAAGTCAACATTATCTTATAGATTAGTTGAAGACTGGGCTTCAGCTACTGTAAAAGAGCGTATAGAAAAACTTGAGGTAAGTTCTGGTGACACAACAGCTGCAATACAAGAACTTGAGAGGGTTATGATTGCAGAGGATGCTGCTTTAGCAGAGAGGATTACCAACCTAAGCACGCATGTTGATACACAAAATGCTGTTCTTGATGCAAAAATAGAGGACTACAATACTGTACAGTCAAATGCTACAAGTGCTTTGGCAAACAAGGTTACAACTGTTGAGACGGAATATAAGGCAGCAGATGCCACACTTACATCTTCTATTCAGAATGAGGCAACTGCAAGATCTACTGCTGATTCTGCTTTAGCTACACAGATCTCAACTGTTGATGCTAATTATAAAGCTGCTGATGTTGTGATAAACGCATCAATAACTTCTGAAGCTACGGCTAGAGCCAACGGAGACTCTGCCCTGGCATCACAAATAACAACTGTTAAGAGTGAGTTAGAAGGTGATATAGCTGCTGTTCAAACTTATGCTACAACTAATATCAACCGAATAGATAATGAAGTTAATGCAGTGGAAGCTAAGTGGGGTGTGAGGGTAAACGTTAATAATAAAATTACTGGTATTCAATTAAACAATAATGGAAATCAAACATCCTTTGCTGTTCAGGCAGATCAGTTTATAATCAGTGATGGTACAAACAATAATGGTGCACCTTTTGAAGTTGTTGGTGGTATTACTAAGATAAAAAATGCAGCTGTAGGTACTATTGCCTCTGATAACTGGAACGGTTCTAATGTTGGTTGGGCTATCACAAAAGATGGTTATGCCAATTTCCAGAATGTTATTGTAAGGGGCAACTTGAGTGCAGACACTTTTACTGGTGTTGGTGGTAGTGGTAATACATTCCCATGTGTTTCTAGATCTAAAGTTACCACAGGGCAGGTTATAACACTGGAGACTTTTTCAATAAGCCAAGCCTTACAGCAAAATTCTTTCATCTTAGTCAATAGGCCGATGGTTGTTTTGTTTGGCTTTGGTAGAGTGTTTCTTAGACTCAGAAGAAAAGATACTAATGCCATTGTAGCATCAGGTTATGGTATGAACTATCTATCGAACATAAATGATGGAGTATCTGTTACCATTTCATTATCTGGAACGTTGCCCGCTGGGTACTCTGGACAATTGGAGTTAGAAGGTTATATGGACAACAGTCATGGCCTAGGCAGTGGTGCTTGGCAGGCTGATGGTGGTTCTAATGGTGATTGGACTGTTTATAGAGCAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8618d02c8c7563f655e1cdc3200f81b03a76a34e0f517a4c6d6e78df4c9fd85d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6725
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages capable of disrupting biofilms from clinical strains of Aeromonas hydrophila with intrinsic antibiotic resistance Kabwe,M., Brown,T.L., Speirs,L., Ku,H., Leach,M., Chan,H.T., Petrovski,S., Lock,P. and Tucci,J. 2020-02-14 — GenBank