Protein

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Genbank accession
ADP00167.1 [GenBank]
Protein name
tail tube protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,56
Protein sequence
MPAINQRIPNFLGGVSQQPDTIKYPGQLRVCDNAVPDVTFGLMKRPPGEFVKTLTNANADGYWYEILRDGDEKYLVQMTALSSYSGTKPIRIWNLLTGVEQSLTNSNGDSLFSYMEQSGTTIPYATQTIQDYTIISNPHKTVTTTGTTDAPLANGNYAFARLDTIAYNTEYILYTGSTAPAANKYYRVTALSVDKGTNDGNTWDDTNKDGRYAGLAQFSFSDSLCEDVEGHVTVNAASYVDSNTANYDGGGTAQSNFLGYTQNYKTRYTAQIVLKDGGLIKTGSESTALSRHHDITIEGISYRVKVKAVEEVDTYESVSGIAFHRTPKNPDKGKLSMTNLISALHASINSSLNNVTSEVIGSGMYLYGSAAPTVNFLGGAVNENMNIIGNTAQDVSRLPSQCKHGYIAQIANSENVDADNYYVKFYADNGVQGSGSWEECVRPHNFSAGSDPMVKGLDPANMPHALVNNRNGTFTFKKLDETTANADSNDNYWKYREVGDDITNPFPSFKGLKISKIFFHRNRLGLIANEQVVMSRPGDYFNFQIVSAITTSDDNPVDITVSDIKPAFINHVLPIQKGVMMFSDNGQFLLFTESDIFSPKTARLKKLSSYETYPALDPIDMGTSVMFTSNVSAYARAFEATIVDDDIPPKIIEQTRVVPEFIPKDITISTVSSAIGIVSFGKKNSSEIYHYKYYDAGDRRDQSAWYSWTVQGKLQHCLYTGGSFWTVTKQGPDGGYQTMVLSKHEYVTEATSGRTYVLGGEATDVGSPLKTARWFEACLDNMTIPTAINYTAQGGSVTGPDFTDLTLAYTPHTADNFYAVALSGTDTAGNEVAGTVIEATSVGTNKATFEGVNMTGWVVAVGYQYTSTITLPSYYLAFDQGKYDLDADLRITGINFEMGIGGPMEFHLESTYADMDDYIQYESGLKLDDSDFGKPPSQMTKSIRVPIQKKNEKYNLTIKIPDPFSTAIISGSWDGRYNQRRHVRR
Physico‐chemical
properties
protein length:985 AA
molecular weight: 108307,33000 Da
isoelectric point:5,16390
aromaticity:0,10761
hydropathy:-0,38081

Domains

Domains [InterPro]
IPR058003
TTP
1–179
IPR058003 IPR058003
DC_0058
STR
1–985
DC_0058
ADP00167.1
1 985
Architecture
STR
STR 1-985
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADP00167.1
1 985
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,7978
Central domain 133 336 205 0,8562
C-terminal 337 985 648 0,3831
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-336
C-terminal
337-985

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage NATL2A-133
[NCBI] 		445692 Uroviricota > Caudoviricetes > Autographivirales > Tangaroavirus > Tangaroavirus NATL2A133
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADP00167.1 [NCBI]
Genbank nucleotide accession
GU071104 [NCBI]
CDS location
range 19304 -> 22261
strand -
CDS
ATGCCAGCTATTAATCAACGGATTCCAAACTTTTTAGGAGGTGTATCTCAACAGCCCGACACAATTAAATATCCAGGACAGCTCAGAGTGTGTGATAATGCAGTGCCTGATGTGACTTTTGGATTAATGAAACGTCCTCCAGGAGAATTTGTGAAGACGTTGACTAACGCTAATGCGGATGGTTACTGGTATGAGATACTAAGAGATGGGGATGAAAAATATTTAGTACAAATGACAGCGTTATCTAGTTATAGTGGGACTAAACCTATAAGGATTTGGAACTTATTAACTGGAGTAGAACAAAGTCTTACCAATAGTAATGGTGATTCTTTGTTTAGTTACATGGAGCAATCAGGTACTACCATACCTTATGCTACACAGACAATACAAGATTATACAATAATAAGTAATCCCCATAAAACAGTTACTACAACTGGTACTACTGATGCTCCCCTTGCTAATGGTAATTATGCTTTTGCTAGGTTAGATACCATTGCTTATAACACTGAGTATATATTATATACAGGAAGTACAGCACCTGCAGCTAATAAATATTATAGAGTAACAGCTCTTTCAGTAGACAAAGGTACTAACGATGGTAACACATGGGATGATACCAATAAAGATGGTCGGTATGCGGGTCTAGCTCAGTTTTCATTTAGCGATAGTTTATGTGAAGATGTTGAAGGACACGTAACAGTTAATGCTGCAAGCTATGTAGATAGTAATACTGCTAACTACGATGGAGGGGGAACTGCTCAGTCAAACTTCTTAGGTTATACACAAAACTATAAAACTAGATATACTGCACAGATTGTATTAAAAGATGGAGGGCTTATTAAAACTGGTAGTGAATCTACAGCTTTAAGCAGACACCACGATATAACTATTGAAGGTATTTCTTATAGAGTTAAAGTAAAAGCAGTCGAAGAAGTTGATACATATGAGAGTGTTAGTGGGATAGCTTTCCACCGTACACCTAAGAATCCTGATAAGGGTAAACTTAGTATGACTAATTTAATATCAGCATTACACGCTTCAATTAATTCTAGTCTAAATAATGTAACTTCAGAAGTTATCGGTAGTGGTATGTATCTTTATGGTAGTGCTGCTCCTACAGTAAACTTCTTAGGTGGTGCTGTAAATGAAAACATGAATATCATTGGTAACACAGCACAAGATGTAAGTCGATTACCAAGTCAATGTAAACATGGTTATATAGCACAGATTGCTAACTCAGAAAACGTAGATGCTGATAATTATTATGTAAAATTTTATGCGGATAATGGTGTTCAAGGTTCTGGTAGTTGGGAAGAGTGTGTAAGACCACACAACTTCTCGGCAGGTAGTGACCCTATGGTTAAGGGTTTAGACCCTGCTAATATGCCACACGCTTTAGTTAACAATCGTAACGGTACCTTTACTTTTAAAAAGTTAGATGAAACTACAGCTAATGCTGATAGTAATGATAACTACTGGAAGTATAGAGAAGTTGGTGATGATATCACTAACCCATTCCCTAGTTTTAAAGGCTTAAAAATTTCCAAAATATTTTTCCATAGAAATAGATTAGGATTAATTGCAAATGAGCAGGTAGTTATGAGCCGTCCTGGAGATTATTTTAATTTCCAAATTGTGTCTGCTATAACTACCAGTGATGACAACCCAGTTGATATAACAGTATCAGACATTAAACCTGCATTTATTAACCATGTCTTACCTATTCAAAAAGGTGTGATGATGTTTAGTGATAACGGGCAATTTTTGTTATTTACTGAGTCTGATATTTTTAGTCCAAAAACTGCTAGGTTAAAGAAACTATCTAGTTATGAAACATACCCAGCTTTGGACCCTATTGATATGGGAACATCAGTTATGTTTACTTCTAATGTATCTGCTTATGCTAGAGCGTTTGAAGCAACAATTGTTGATGATGATATACCTCCTAAAATAATAGAGCAGACTAGAGTTGTACCTGAGTTTATACCTAAAGATATAACAATATCTACAGTATCAAGTGCTATAGGTATTGTAAGTTTTGGTAAGAAAAATTCTTCTGAAATTTATCATTATAAATACTATGATGCTGGAGACAGAAGAGATCAATCCGCTTGGTATAGCTGGACAGTACAAGGTAAATTACAGCATTGTTTATATACTGGTGGTAGCTTCTGGACTGTTACTAAACAAGGTCCAGATGGAGGTTATCAAACAATGGTTTTAAGTAAACATGAGTATGTTACAGAAGCCACCAGTGGTAGAACATATGTACTAGGTGGAGAAGCCACTGATGTAGGTTCCCCCTTAAAGACAGCTAGATGGTTTGAAGCTTGTCTAGATAACATGACAATACCAACTGCTATTAATTATACAGCTCAAGGAGGTTCAGTAACAGGGCCAGATTTTACAGATTTAACACTAGCTTATACACCACACACCGCTGATAATTTCTATGCTGTAGCCCTTTCTGGAACAGATACAGCTGGTAATGAGGTTGCTGGTACGGTAATTGAAGCTACTTCTGTAGGTACTAATAAAGCTACGTTTGAAGGAGTCAATATGACTGGATGGGTAGTGGCTGTAGGGTATCAATATACCTCTACAATTACACTTCCTAGCTATTATTTAGCTTTTGATCAAGGTAAATATGACCTAGATGCTGACCTTAGAATCACTGGTATTAACTTTGAGATGGGTATTGGTGGTCCTATGGAGTTCCATTTAGAGTCTACTTATGCTGATATGGATGATTATATACAGTATGAATCAGGTTTAAAGCTAGATGACAGTGATTTTGGTAAACCACCTTCTCAAATGACTAAAAGTATTAGAGTACCTATACAGAAAAAGAATGAAAAATATAATTTAACTATAAAAATACCCGATCCTTTTTCCACCGCTATTATCTCAGGTTCTTGGGATGGTAGGTATAACCAAAGAAGACATGTACGAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
97b7bc4e26937d36bbe02db7e13a56f707519dc6b5d7f1652413fa72b6b76030
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7138
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage NATL2A-133 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank