Protein

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Genbank accession
URA06912.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MAKLIPLSLADAYSKRGTSTCFVIKIVTRENVVYGFTTADFVVRFDDGLGVVSYLPSEELRPQNIQSSADMTVDNTKLIGWFSQLVEQKVLSGAFDAAEITIYRVAYLRLYAGYEIVGYGTVGEIEYSSDAKDKRKVEFRSLTQQLTVNANQFYSLTCRAEFGDDRCGMPFVWFDGVVETIPNQNPYIMFKVTGVAQPADYFELGVIRIVDGPNAGADLEIESWAADGTIKLSYVAPYALTDGINVRLRKDCGKTETDCIAYGNIVNMRAEHLTPTEDQSLMVPGAYIKSQNSL
Physico‐chemical
properties
protein length:294 AA
molecular weight: 32603,61690 Da
isoelectric point:4,75000
aromaticity:0,10884
hydropathy:-0,06531

Domains

Domains [InterPro]
PF09931
ATT
8–169
PF09931 IPR018964
DC_0733
STR
9–187
DC_0733 IPR018964
IPR011928
Unmapped
26–284
IPR011928
URA06912.1
1 294
Architecture
ATT
STR
RBD
ATT 8-169 | STR 170-187 | RBD 201-278 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URA06912.1
1 294
Domain Start End Length (AA) Confidence
N-terminal 1 181 181 0,9726
Central domain 182 283 103 0,0414
C-terminal 284 294 10 0,1762
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-181
Central
182-283
C-terminal
284-294

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Pfeifenkraut
[NCBI] 		2939132 Uroviricota > Caudoviricetes > Stanbaylleyvirinae > Shirevirus pfeifenkraut >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URA06912.1 [NCBI]
Genbank nucleotide accession
ON189044 [NCBI]
CDS location
range 12355 -> 13239
strand -
CDS
ATGGCGAAGCTTATTCCCCTTTCGCTGGCGGATGCGTACAGCAAGCGCGGAACGTCAACCTGTTTCGTTATCAAGATTGTGACCCGTGAAAATGTAGTGTACGGGTTCACGACCGCTGATTTCGTCGTCAGGTTTGATGATGGCTTAGGCGTTGTGTCGTACCTGCCAAGCGAAGAACTGCGACCGCAGAACATTCAATCGTCAGCCGATATGACGGTTGACAATACAAAGCTGATTGGTTGGTTTAGTCAGTTGGTTGAACAAAAGGTTCTGTCCGGCGCGTTCGACGCTGCGGAAATCACCATTTACCGCGTTGCATATCTGCGCCTGTACGCCGGATATGAAATCGTCGGTTATGGCACCGTTGGCGAAATCGAATACAGCAGCGACGCCAAGGACAAGCGCAAGGTTGAATTTCGCAGCCTGACGCAGCAATTAACGGTAAACGCAAATCAGTTTTACAGCCTGACGTGCCGCGCCGAATTCGGCGACGACCGCTGCGGAATGCCGTTCGTTTGGTTTGATGGCGTCGTTGAAACGATCCCGAATCAAAACCCTTACATTATGTTCAAGGTGACTGGCGTTGCGCAGCCCGCAGATTACTTTGAACTTGGCGTGATTCGCATTGTCGATGGGCCGAACGCTGGCGCGGATTTAGAAATTGAATCTTGGGCCGCTGACGGCACGATTAAACTTAGCTACGTTGCGCCGTATGCGTTGACCGATGGCATTAACGTTCGCCTTCGCAAAGATTGCGGTAAAACCGAAACTGATTGCATCGCATACGGCAATATCGTTAATATGCGGGCTGAACACCTGACGCCGACCGAAGATCAATCGTTGATGGTGCCGGGCGCTTACATTAAATCGCAGAATTCATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
219c894dc78c881d003a10f1a5bb7bd8b8cc91b99ff71f5086693aa513d9876e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8658
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of novel Xanthomonas phages for the plant pathogens X. translucens and X. campestris Erdrich,S.H., Sharma,V., Schurr,U., Arsova,B. and Frunzke,J. 2022 — GenBank