Protein

View in Explore
Genbank accession
QBX26478.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MDITIQNVRSPALEHNGRYYKVFQPRTRDELLKLHHMGCVGDTVLTDIQLEQGDFPTSFVEPTVTQRTLSGLFKDMRSIELELRDPNSTLWGKIQQNNQGALTQFFDKNVKSAIAQTAKEIRQEVRDAANSARVQVTSEGVTIGSTTLTGEQLASTISASPRGVDIIAPQVRVKSDMIVDGSVTADKIASGSVTAEHIQAGAITGDKISVDDALIRNLTARDALIDKLTSKQIFTTKIESVVSSSTFLEAYQGKIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGYGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNDVHFYAETNFTGESTTNFYGSVKFTQSPVFAGNINMGNSNIFGNGYNPAGGINRVVWWSELETVAFRKHTDIDAIKKRLNKIEGQLGIS
Physico‐chemical
properties
protein length:410 AA
molecular weight: 44857,72920 Da
isoelectric point:7,02572
aromaticity:0,08780
hydropathy:-0,33293

Domains

Domains [InterPro]
DC_0720
STR
1–407
DC_0720
IPR012892
RBD
14–140
IPR012892
QBX26478.1
1 410
Architecture
STR
STR 1-407 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan326
[NCBI] 		2548108 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus mitis
[NCBI] 		28037 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX26478.1 [NCBI]
Genbank nucleotide accession
MK448908.1 [NCBI]
CDS location
range 35999 -> 37231
strand +
CDS
ATGGACATTACCATTCAAAACGTCCGTTCGCCTGCTCTTGAGCATAACGGACGGTATTACAAGGTATTTCAACCACGGACACGAGATGAACTGTTAAAACTCCACCACATGGGGTGTGTGGGAGATACAGTGCTTACGGATATCCAGCTGGAGCAGGGAGATTTCCCTACTAGCTTCGTGGAACCTACTGTCACACAACGCACCCTGTCAGGTCTCTTCAAAGATATGCGCTCAATAGAGCTGGAATTGAGAGACCCCAATAGCACTCTCTGGGGCAAAATCCAGCAGAACAATCAAGGGGCGCTGACCCAATTCTTTGACAAGAATGTCAAGAGTGCAATCGCTCAGACGGCCAAAGAAATCAGGCAGGAAGTACGAGACGCTGCTAACAGTGCGAGGGTACAAGTGACATCGGAAGGTGTTACTATCGGCTCTACTACTCTAACGGGTGAGCAGTTAGCCTCTACCATTTCCGCAAGTCCCAGAGGCGTTGATATCATCGCTCCACAGGTTAGAGTAAAATCCGACATGATTGTGGACGGCTCTGTTACGGCTGATAAAATAGCTTCTGGTTCTGTCACTGCTGAACACATCCAAGCTGGTGCTATCACAGGCGATAAAATCAGCGTAGATGATGCACTTATTCGGAACCTGACAGCTAGAGATGCCTTGATTGACAAGCTGACATCCAAGCAAATCTTCACAACCAAGATTGAATCTGTCGTATCTAGTTCAACCTTCCTAGAAGCTTACCAAGGTAAAATCGGAGGATTTACTCTTGGACAATTCGACCAAGGCGGAGGACGCTGGATTTCTGGCGTAAACCAATTTTCAGTTGGTATGGGGAATGGTGCCGGTTATGGAGTCCGGACAGCCTTCTGGGCAAACTGGGGAAATAATTGGAACTATGCCGGACCTAAAGCATGGAATGTCAATACCGATGGGAAAATGTACTGTAGGAATGATGTGCATTTCTATGCAGAAACCAATTTCACAGGCGAGAGCACCACGAATTTCTATGGTTCAGTAAAATTCACTCAGTCACCCGTATTTGCTGGAAATATCAACATGGGAAATAGTAACATTTTCGGTAATGGATATAATCCAGCTGGAGGGATCAATAGAGTTGTTTGGTGGAGCGAACTTGAAACAGTCGCTTTCCGGAAACATACAGATATAGATGCAATTAAGAAACGTCTAAATAAAATTGAAGGTCAGCTAGGAATTAGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b913525e9245a93f5db93430255bd1fd69540cc6b7c25b61011d4b5b178af6a6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5861
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank