Protein

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Genbank accession
AOO12923.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MPYQFSASPLYVEEGQSIQFRYEAPPLFNDITQVKIEIGELTVFWIIETKLEDFEPDPFFLRNVDDAEPDTLLTYAATTDPDNGVAYTGLASDPDPLREGEEVITITGLDPGTQAPLIVSSNVIDVNNWSYRLRLYNEGSSSYGAWGAWTRALNNTVSNLDQIQVRLVSSSSPSDTKNVVVTVGTGSATWDVTTGAIPVNTPNPAPDFGSLNNLPLGQLVYSDIAQILGLTTSAIISVDNGAEIAVSNFNTTFTNADGYEVLNNISNGWGNNLTVSNGQYVQLRGTSSATPTATINFSVTVGDGAGISVWQITSGQGIDDNPTNFVFQDLVGQIPGQTGLRSETASGSSTSVAGRNIALVGGLDAGLFVPVTVRPADTNIVPKISINGGSSGLINNVTVQNGDTIELVVDNSTDITNPVIPGQGVVTVGINVGNRFIQTWTVANWTGPDTIPAFTPINQVINRTPGGASIIGPIGLTDFNLPITISATNPESFNEFNFATNENIGDVLFSINGDSATVGPRTVNPDPGGDPVFITIIMQQPGNADLDPVQGLSNYGQTVITFGDASPFQLRSINYAVKPIPPAYLGVWYSEKNAYFDDTAWAAAGEDPNNARDYYRAPKFDGYSIGTVVPITKETPLNDGNFGYGDIEERYPGFLPCDGATFAAADYPWLWEAIGNTYGGNGAYIPATKSYTGNFNVPDYRNVRMVGAGIVDSNRGSSSFVPVTSAGGSFELTGSTGGYWYVDDVDVAGPDPLEQVVAPAGSSDGIESEYFTLGTPRTFGTEELEADVEFTVTGEVVANIGPVSDVSVRPPQHEHEVISGQIDSDDGDPLIPWGTRAYYGTSASGSQNWSGRPDSDTDAVDDGYWEDAGFWNFGQFNSEVENSGRGSLLDLLPGVGSSSVAFGNYWGSPFSEISGLSDDYFTKNGNPNNGDCGVIDTTETRARIDNYLSIYTGTLNHSHLLGTDPVTNPQTDFSYGNVNSDATAFRQGLATFNSIFALKFTQNASTDGGSGVDIELNPATFSWNNTSKPIPTAAMNPQRKVPIIAPFHKVKYIIKAY
Physico‐chemical
properties
protein length:1057 AA
molecular weight: 112615,10990 Da
isoelectric point:4,06452
aromaticity:0,10123
hydropathy:-0,21693

Domains

Domains [InterPro]
DC_0346
STR
1–1041
DC_0346
IPR037053
ATT
620–701
IPR037053
SSF88874
STR
652–742
SSF88874
IPR011083
ATT
652–702
IPR011083
AOO12923.1
1 1057
Architecture
STR
ATT
STR
STR 1-619 | ATT 620-702 | STR 703-1041 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOO12923.1
1 1057
Domain Start End Length (AA) Confidence
N-terminal 1 705 705 0,8062
Central domain 706 904 200 0,6532
C-terminal 905 1057 152 0,7453
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-705
Central
706-904
C-terminal
905-1057

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM44
[NCBI] 		1278485 Uroviricota > Caudoviricetes > Pantevenvirales > Vellamovirus > Vellamovirus rhodeisland44
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO12923.1 [NCBI]
Genbank nucleotide accession
KX349297.1 [NCBI]
CDS location
range 43957 -> 47130
strand +
CDS
ATGCCATATCAGTTTAGTGCCAGTCCGCTGTATGTTGAAGAGGGACAGTCTATCCAGTTTCGTTACGAAGCTCCTCCTCTGTTCAACGATATTACTCAAGTCAAGATTGAGATTGGCGAGCTTACTGTCTTCTGGATTATTGAGACTAAACTAGAAGATTTTGAACCTGATCCGTTCTTCCTTAGAAATGTTGATGATGCAGAACCCGATACTCTATTAACATATGCAGCAACAACAGATCCTGATAATGGTGTTGCATATACTGGACTAGCAAGTGATCCTGATCCACTAAGAGAAGGTGAAGAAGTTATTACAATCACTGGTCTTGATCCTGGAACACAGGCACCATTGATTGTTAGTTCCAATGTTATTGATGTAAACAACTGGTCTTATCGTCTAAGACTATACAACGAAGGATCCAGTAGTTATGGTGCTTGGGGTGCATGGACTAGAGCACTTAACAATACCGTATCTAATCTTGACCAGATTCAGGTCAGACTAGTATCTTCTTCTTCACCATCAGACACAAAGAATGTTGTTGTTACTGTTGGAACAGGTTCTGCTACTTGGGATGTTACAACTGGTGCAATTCCAGTCAACACACCAAATCCAGCACCAGATTTTGGTTCGCTAAACAATCTACCACTAGGACAACTTGTATACAGTGATATTGCACAAATTCTAGGATTAACTACTTCTGCTATCATTAGTGTTGATAATGGTGCAGAGATTGCAGTATCTAATTTTAATACTACATTTACTAATGCTGATGGATATGAAGTTCTGAATAATATTTCAAATGGATGGGGCAACAACCTGACAGTAAGTAATGGTCAGTATGTTCAGTTAAGGGGCACATCATCAGCAACACCAACAGCAACTATTAACTTCAGTGTTACTGTTGGTGATGGTGCTGGTATTTCTGTATGGCAGATTACATCTGGACAAGGTATTGATGATAATCCAACTAATTTTGTATTCCAAGATCTAGTTGGTCAGATTCCTGGACAAACTGGTCTTAGATCAGAAACTGCATCAGGTTCTTCTACATCAGTTGCTGGCAGAAATATAGCACTGGTTGGTGGACTTGACGCTGGACTATTTGTTCCTGTTACAGTCAGACCTGCTGATACTAATATTGTTCCTAAGATTAGTATTAATGGTGGTTCTTCTGGTCTCATCAACAATGTCACAGTTCAGAATGGTGATACTATCGAACTGGTTGTTGATAACTCTACAGATATCACTAACCCTGTAATTCCTGGTCAAGGTGTTGTTACTGTTGGTATTAACGTAGGAAACAGATTTATTCAGACATGGACTGTAGCAAACTGGACTGGTCCAGATACTATTCCAGCATTCACACCTATCAACCAAGTTATCAATAGAACTCCTGGTGGTGCTAGTATCATTGGTCCTATTGGATTGACTGACTTCAATCTACCAATCACTATTAGTGCAACAAATCCTGAATCATTTAATGAATTTAACTTTGCTACCAATGAGAACATTGGTGATGTTCTATTCTCAATCAATGGTGATTCAGCAACTGTAGGACCACGAACAGTTAATCCTGATCCTGGTGGTGATCCTGTATTCATTACCATTATTATGCAACAACCTGGGAATGCAGATCTTGATCCTGTTCAAGGACTGTCAAATTATGGTCAAACAGTCATTACATTTGGTGATGCATCTCCATTTCAGTTGAGATCTATCAACTATGCTGTTAAACCTATCCCTCCTGCATATCTTGGTGTGTGGTATTCTGAGAAGAATGCATATTTTGATGATACAGCATGGGCAGCAGCAGGCGAAGATCCTAACAATGCTAGAGATTACTATAGAGCACCTAAGTTTGATGGTTACTCTATTGGAACTGTTGTTCCCATCACTAAAGAAACACCACTAAATGATGGTAACTTTGGTTATGGTGATATTGAAGAAAGATATCCAGGATTCTTACCATGTGATGGAGCAACCTTTGCTGCAGCAGATTATCCTTGGTTGTGGGAAGCAATTGGTAACACATATGGTGGCAATGGTGCATATATTCCTGCAACTAAATCCTACACTGGAAACTTCAATGTTCCAGACTATCGTAATGTTAGAATGGTAGGTGCTGGTATCGTTGACTCTAATAGAGGATCATCTTCTTTTGTTCCTGTAACAAGTGCTGGTGGTTCATTTGAACTGACTGGATCAACTGGTGGTTACTGGTATGTTGATGATGTTGATGTTGCTGGTCCAGATCCACTAGAACAAGTTGTTGCACCTGCTGGATCTAGTGATGGTATAGAATCAGAATACTTTACACTAGGAACTCCAAGAACATTTGGAACTGAAGAACTAGAGGCAGATGTTGAATTTACTGTCACTGGTGAAGTTGTTGCTAACATTGGTCCTGTTAGTGATGTTTCTGTTCGTCCTCCACAGCACGAACACGAAGTGATTAGTGGACAAATTGATAGTGATGATGGTGATCCACTCATTCCATGGGGCACTAGAGCATACTATGGCACATCTGCTAGTGGTTCACAAAACTGGAGTGGAAGACCTGATAGTGATACAGATGCTGTTGATGATGGTTACTGGGAAGATGCAGGATTCTGGAACTTTGGTCAGTTTAATTCAGAAGTTGAAAACTCTGGCAGAGGATCACTTTTAGATCTGTTGCCTGGTGTAGGTAGCAGTAGTGTAGCATTTGGTAACTACTGGGGTTCACCATTCTCGGAGATTAGTGGTCTAAGTGATGACTACTTCACTAAAAATGGTAATCCAAATAATGGTGACTGTGGAGTTATTGACACAACAGAAACTCGTGCTAGAATAGATAACTATCTGTCTATCTACACTGGCACACTAAATCACTCTCACTTACTAGGAACTGATCCTGTTACTAATCCACAAACTGACTTTAGTTATGGTAACGTCAACTCAGACGCTACTGCATTCAGACAAGGACTAGCAACATTCAACTCTATATTCGCACTTAAGTTTACTCAGAATGCATCGACAGATGGTGGATCAGGTGTTGATATTGAGCTCAATCCAGCAACATTCTCATGGAACAATACCAGCAAACCAATTCCTACTGCTGCTATGAATCCACAGCGCAAGGTTCCTATCATTGCACCATTCCATAAAGTTAAATATATAATTAAGGCATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d3feb8aa1836c6212e6ad07a2f29f8f1524671cdeaab916a16d0e6d36ea6ed76
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5079
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50