Protein

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Genbank accession
YP_009274470.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,77
Protein sequence
MTIKYWNGSAFVDPSQVRYWDGSAFVAPQAIYEWVADEFIKRWPASITYRMNKVGESHAFASQVPVRGWESDATEPGPLFDGLLTGSGVTTVEVSLSVKSGSGYSGSVLVKLDGVTIITIDAYNLTSYTIKTGSWTGVATEGQQVTVETSTVHGVGVNAPSFVRVTSAVPHKVSWADGFNRANTTSSVGLGDNWWNFSSYGLSEYPSINGNQATGAGGASVSNSGNGAAWKEPVPAGVDNYFVEAYIPSLSSGSTGQEPTGLLVRANESSNHYNNTPGSEAVFFAMSTGNWRVYRARTAANSGSTNLQTGSMSNSAGGTLRVEVHGDLMIAKYKDQVITAADITGIGEGRQVGIHTNGSNAKHDDFASGQCDPVSFTDRQRIEITTPHTVTTGTTTVLGWTTSADEDALVSDNSLLIAKSNSSATVSCSIQLTSTQTSGTTTWTLIMLRNGTAAMTRTFATTAAGQYTIEDLRYNGPVAVGDRFHITALRSGGTSPGGTVTTGTTLRTSEMLPPLRQRMTKSGTASTLQNPVTGWTSSNADAPSWIDTNKLRVQGRGAAEIYWQVDIGQRSSAQGRTQQLWHNGTLIDEFIPDPSVNMVYQRGPFQVAVENDDLVYMATTGTSVSGGGVVNATTTFIEVGPRS
Physico‐chemical
properties
protein length:643 AA
molecular weight: 68175,40980 Da
isoelectric point:5,44975
aromaticity:0,08398
hydropathy:-0,26019

Domains

Domains [InterPro]
DC_2040
STR
1–643
DC_2040
YP_009274470.1
1 643
Architecture
STR
STR 1-643
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009274470.1
1 643
Domain Start End Length (AA) Confidence
N-terminal 1 48 48 0,7601
Central domain 49 247 200 0,0749
C-terminal 248 643 395 0,9536
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-48
Central
49-247
C-terminal
248-643

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage OneUp
[NCBI] 		1838074 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009274470.1 [NCBI]
Genbank nucleotide accession
NC_030917 [NCBI]
CDS location
range 38445 -> 40376
strand +
CDS
ATGACAATCAAGTATTGGAACGGTAGCGCGTTCGTTGATCCGTCTCAGGTTCGTTACTGGGATGGGTCGGCGTTTGTTGCGCCGCAAGCGATCTACGAGTGGGTTGCAGATGAGTTCATTAAGCGTTGGCCTGCGTCGATCACGTATCGAATGAATAAGGTTGGGGAGTCGCACGCTTTCGCCTCGCAGGTTCCGGTTAGGGGTTGGGAGAGTGACGCTACTGAACCGGGGCCACTCTTTGACGGTTTGTTGACTGGTAGTGGTGTCACGACGGTTGAGGTTTCTCTGAGCGTGAAGTCGGGGTCAGGCTATAGCGGGTCTGTTTTGGTGAAGCTGGATGGGGTCACGATCATTACGATTGACGCCTACAACCTGACTTCGTACACGATTAAGACGGGTTCATGGACTGGGGTTGCCACGGAGGGCCAGCAGGTCACTGTGGAGACTTCTACGGTGCATGGCGTGGGCGTGAATGCTCCGTCGTTTGTGAGGGTCACTTCGGCTGTCCCGCACAAGGTGTCGTGGGCGGACGGCTTCAATCGCGCCAACACTACATCCAGTGTTGGGTTGGGTGACAATTGGTGGAACTTTAGTAGTTACGGCCTTAGCGAGTATCCCAGCATTAATGGCAATCAGGCCACCGGCGCTGGCGGTGCGTCGGTGTCCAACTCGGGCAACGGTGCCGCATGGAAGGAACCCGTACCGGCTGGGGTGGACAACTATTTTGTTGAGGCTTACATCCCGAGCTTGTCGTCTGGCAGTACAGGGCAGGAGCCGACGGGGTTGCTGGTTCGGGCTAATGAGAGCAGCAACCATTACAACAACACACCCGGCAGTGAAGCGGTGTTCTTTGCCATGTCAACAGGCAACTGGCGGGTTTACCGGGCGCGCACCGCAGCGAACTCGGGGTCCACGAACCTTCAGACGGGCAGTATGTCCAACTCCGCGGGCGGCACGCTTCGGGTAGAGGTTCACGGCGACCTGATGATTGCGAAGTACAAGGATCAGGTCATTACGGCGGCGGATATTACTGGAATTGGCGAGGGTCGCCAGGTTGGCATCCACACGAACGGCTCCAACGCTAAGCATGATGACTTCGCTTCGGGCCAGTGCGATCCGGTTAGCTTCACGGATCGTCAGCGCATTGAGATTACTACCCCGCACACGGTGACGACGGGCACCACTACGGTTCTCGGCTGGACGACTTCGGCGGACGAGGATGCGCTTGTCTCGGATAATTCCCTGCTGATCGCGAAAAGTAATTCGTCGGCCACGGTGTCATGCTCAATTCAGCTAACTTCGACACAAACGTCGGGAACCACCACGTGGACGCTCATCATGCTGCGTAACGGAACTGCAGCGATGACCCGAACATTCGCCACTACGGCGGCGGGCCAGTACACGATTGAGGATCTTCGTTACAACGGACCTGTCGCGGTGGGGGATAGGTTTCATATCACCGCTCTTCGGTCAGGCGGAACCTCGCCTGGTGGGACCGTGACAACGGGAACAACACTCCGCACGTCGGAGATGCTGCCCCCGTTGCGGCAGAGGATGACCAAGAGCGGTACTGCGAGCACGCTTCAAAACCCGGTTACGGGTTGGACCTCCTCTAATGCCGACGCGCCAAGTTGGATCGACACCAACAAGCTGCGAGTGCAGGGGCGTGGGGCTGCCGAGATCTACTGGCAAGTAGATATTGGACAACGGTCCAGCGCTCAGGGACGCACCCAGCAGCTCTGGCACAATGGCACGCTTATTGACGAGTTCATCCCAGACCCGAGCGTGAATATGGTCTACCAGCGTGGCCCATTCCAGGTCGCGGTGGAGAACGATGACCTGGTCTACATGGCAACGACTGGAACCAGCGTCTCGGGCGGCGGCGTGGTCAATGCGACCACCACCTTCATTGAGGTGGGCCCCCGATCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c0c7aaf3ac0e1ec9ebdaf2e66db4ca31f23b338e05dcc80ad08b9d173291ee9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8225
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50