Protein
View in Explore- Genbank accession
- CAO2432352.1 [GenBank]
- Protein name
- major tail protein
- RBP type
-
TSP
- Protein sequence
-
MHLPNGSQIFIGVNMGEPISATQISNADNPCLQPKTLETIKKGAYVLIETSSWGKLVSRVLRVKEVSDNVSVTLEGVSTKDTNVFPEGQNTATFREVKSWVEVPCVQDLAQDGGEQQYYTYQCLADDQEQQLPTYKSAVSLTYTFAHEYDNPIYPILREAEESGDVTALRMYVPKAKEMRCWAGVLSFNDIPQTTMNEIETVSLSVSLKGRFTFLPSDVK
- Physico‐chemical
properties -
protein length: 220 AA molecular weight: 24544,42370 Da isoelectric point: 4,78615 aromaticity: 0,08636 hydropathy: -0,31864
Domains
Domains [InterPro]
DC_0037
ATT
1–50
ATT
1–50
1
220
Architecture
ATT 1-50 | TAS 51-215 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
220
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 213 | 213 | 0,5647 |
| Central domain | 214 | 213 | 1 | 0,0581 |
| C-terminal | 214 | 220 | 6 | 0,9733 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (6 AA) is still below minimum (10 AA). Sequence may be too short.
C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (6 AA) is still below minimum (10 AA). Sequence may be too short.
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-213
1-213
Central
214-213
214-213
C-terminal
214-220
214-220
Taxonomy
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAO2432352.1
[NCBI]
Genbank nucleotide accession
OZ346198
[NCBI]
CDS location
range 9217 -> 9879
strand +
strand +
CDS
ATGCACTTGCCTAATGGTTCTCAAATTTTCATCGGCGTTAATATGGGTGAGCCAATTAGCGCAACTCAAATCAGCAATGCTGATAATCCCTGTTTACAACCAAAAACACTGGAAACCATCAAAAAAGGCGCTTATGTTCTTATTGAAACATCTTCTTGGGGCAAACTTGTTAGTCGAGTGCTTCGAGTTAAGGAAGTATCAGATAATGTAAGTGTTACTCTTGAGGGTGTTAGCACTAAAGATACAAACGTATTTCCAGAAGGACAGAACACAGCAACTTTCCGAGAAGTGAAATCTTGGGTAGAGGTTCCTTGCGTGCAGGATCTTGCGCAGGACGGCGGCGAGCAACAGTATTACACTTATCAGTGTTTGGCTGATGACCAAGAGCAGCAGTTGCCGACCTACAAGAGCGCCGTTTCTCTCACCTATACTTTCGCGCATGAGTATGATAATCCGATTTATCCGATCTTGCGCGAGGCTGAGGAATCCGGCGACGTTACCGCCTTGCGTATGTACGTGCCGAAAGCTAAAGAGATGCGTTGCTGGGCTGGCGTGTTGTCTTTTAATGACATTCCGCAAACCACCATGAACGAAATTGAAACTGTTTCCCTTTCCGTATCTCTGAAAGGTCGATTCACGTTCTTACCTTCTGACGTTAAGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
85e30b84c4e000b836fe26b4215465fc2790da0338efe1bfe23d7eb5efe2cf12
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50