Protein

Genbank accession
QBQ72219.1 [GenBank]
Protein name
sialidase domain-containing/CalX-like domain superfamily protein
RBP type
TF
Evidence RBPdetect
Probability 0,60
TF
Evidence Phold
Probability 1,00
Protein sequence
MATTNLNGSTTATFAVTLSVPLEKPISVKWNTEDGTGKAGVDYEAASGTLEFAQGETSKAIQVVVYGVDPDAPVSGKTFLIRIVPPSDAIVGNALTECTIVVTDDEGTPVTTVQVATGPKGLKGDPGLSAYELAKLQGYEGTLEDWMNEIADASQAAQRAQDAANSVDKKIADGTASAVTQATAQAERSKSEADRSKAQADRADVAASVASTGRVWATTAEAIASGLVPNGGYFNVLSPDGDMYANQYQNVNGTAVATGKDLPSGQAVRDVKETVFLSPDNSNILCKIVDANGAHLIVILKNGKWYAMGQDARIQEVAQASAEAIIYSVINETSLLSVNDSVGGKMMRQVKNGDLYLPNMITAIQKMYAFSHEKEIRDAVNAVTDIDDLIAAANKDKSFYALDNTGKLTTQGLTFGRVTKDSGFLVNGWPQGKSCADTTGRIYQGFNRGSSHVSNDKLPVVAFSDDMGKTWSEPVAVVTGKVNARGTDAWALGVDDQDRPWTIVRNRGASNAVGSTYYEIYRSDDRGVTWTLVGRIDQITQSGNVPELFHDLEFMNGRFYTAYHFASSSRVGFLSFSPDNPLTTMVNVDVISHGDPAYPANTTVLCEATITADPSKDGGGVWLFGGLRTQVSTTPPKMYFIKGDLTGFEMFDAPESVRLSPVPVKRVGDQMIALMMERYNTGQSNLWIGSATDFYLKQAANFYKVDLGKMLRTPIPSNGSTNQGVQDMVAVNGTIFLSWAQQFENGDTDIYCATFNPTRPNSLTTYEFLEKM
Physico‐chemical
properties
protein length:772 AA
molecular weight: 82904,74880 Da
isoelectric point:4,82622
aromaticity:0,08290
hydropathy:-0,23912

Domains

Domains [InterPro]
IPR038081
2–132
IPR038081 Coil Coil G3DSA:2.120.10.10
IPR038081
7–108
IPR038081 IPR036278
IPR003644
9–66
IPR003644 cd15482
QBQ72219.1
1 772
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage Parlo
[NCBI] 		2557554 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72219.1 [NCBI]
Genbank nucleotide accession
MK618715 [NCBI]
CDS location
range 37038 -> 39356
strand +
CDS
ATGGCAACGACCAATCTTAACGGCTCCACTACAGCAACGTTCGCGGTAACGCTATCGGTGCCTTTGGAAAAGCCGATCAGCGTCAAATGGAATACTGAGGACGGAACCGGTAAGGCGGGCGTCGATTACGAAGCCGCCAGCGGCACGCTGGAATTCGCACAGGGCGAAACCAGCAAGGCGATTCAGGTTGTTGTCTATGGCGTAGATCCTGATGCGCCGGTGAGCGGGAAAACCTTCTTAATCCGCATCGTTCCACCGTCTGATGCTATCGTGGGCAATGCTCTCACTGAATGCACCATCGTCGTGACGGATGACGAAGGTACTCCGGTTACGACGGTGCAAGTTGCCACCGGGCCGAAGGGGCTCAAGGGCGATCCAGGCTTAAGCGCGTATGAGCTGGCAAAGCTACAGGGGTACGAAGGCACTCTCGAAGACTGGATGAACGAGATTGCCGACGCTTCACAGGCTGCGCAGCGAGCTCAGGACGCTGCCAATTCAGTCGATAAGAAGATTGCTGATGGCACAGCAAGCGCAGTAACGCAGGCAACTGCGCAGGCAGAACGCTCGAAGAGCGAGGCAGACAGATCGAAGGCTCAGGCCGATCGGGCTGATGTGGCTGCGTCGGTCGCATCTACTGGACGAGTATGGGCGACAACGGCAGAGGCTATCGCTAGTGGGCTGGTGCCAAATGGCGGTTACTTCAATGTGCTGTCTCCAGACGGCGACATGTACGCCAATCAATATCAGAACGTCAACGGTACCGCCGTAGCGACTGGCAAGGATCTTCCGTCAGGGCAGGCTGTTCGCGACGTGAAGGAAACGGTTTTCCTTTCACCGGATAACAGCAACATCTTGTGCAAGATCGTTGATGCAAACGGGGCTCACCTCATTGTCATTCTCAAAAATGGGAAGTGGTATGCAATGGGGCAAGACGCGCGCATCCAGGAGGTTGCTCAGGCTTCCGCTGAGGCAATAATCTACAGCGTCATCAACGAAACAAGCCTTCTTTCCGTTAACGATTCGGTCGGCGGTAAAATGATGCGGCAGGTGAAGAACGGCGATCTATACCTGCCGAATATGATCACTGCCATCCAAAAGATGTATGCGTTTTCGCACGAAAAAGAAATCCGTGATGCTGTCAATGCGGTAACGGATATCGATGACCTGATCGCAGCGGCAAATAAAGACAAGAGCTTTTACGCGCTTGACAATACTGGGAAGCTGACCACGCAAGGCTTAACGTTTGGCCGCGTCACCAAAGATTCAGGTTTCCTCGTAAATGGCTGGCCTCAGGGCAAATCATGCGCCGACACCACAGGAAGAATTTATCAAGGCTTCAACCGTGGCAGCTCTCACGTATCGAACGATAAGCTGCCAGTGGTCGCTTTCTCCGACGATATGGGCAAAACGTGGTCTGAACCGGTTGCCGTCGTTACCGGCAAGGTTAATGCTCGCGGTACCGATGCCTGGGCGCTGGGCGTTGATGATCAGGATCGTCCATGGACTATCGTGCGAAATCGTGGGGCATCGAACGCCGTCGGCTCGACGTATTATGAAATTTACCGGTCTGACGATCGCGGAGTAACCTGGACGCTCGTAGGAAGAATCGACCAAATCACGCAAAGTGGAAACGTGCCTGAGCTGTTCCATGACCTGGAATTTATGAACGGCCGGTTCTACACCGCTTACCACTTCGCGAGTTCTTCACGCGTGGGCTTCCTGTCATTCTCACCAGACAATCCGCTAACCACAATGGTCAACGTGGATGTGATTTCGCATGGTGACCCGGCATATCCAGCCAACACCACCGTTCTTTGCGAAGCGACGATAACCGCCGACCCATCCAAAGACGGCGGCGGTGTGTGGTTGTTCGGTGGATTGAGAACGCAGGTATCCACCACGCCGCCTAAAATGTATTTCATAAAGGGCGATCTCACCGGCTTCGAAATGTTCGATGCGCCAGAAAGCGTGAGATTAAGCCCGGTGCCGGTGAAGCGAGTTGGTGACCAGATGATCGCTTTGATGATGGAGCGATATAATACCGGTCAGTCAAACCTTTGGATCGGCTCAGCCACGGATTTCTATTTGAAGCAGGCCGCCAACTTCTACAAGGTTGATCTCGGCAAAATGCTCAGGACGCCGATCCCCAGCAACGGCTCAACCAACCAAGGCGTTCAGGATATGGTTGCGGTCAACGGCACCATTTTCCTGTCCTGGGCTCAGCAGTTTGAGAACGGCGACACCGATATTTATTGCGCAACCTTCAACCCGACGCGACCAAATTCGCTGACGACCTATGAATTTTTGGAGAAAATGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3d8497a0fa50a1e8d746ac69b9e6bf3e6212e209a09247669e01826f3dcbb23b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2815
Evidence 0,2815
Download PDB

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Serratia marcescens Podophage Parlo Bockoven,R., Gutierrez,J., Newkirk,H., Liu,M., Cahill,J. and Ramsey,J. 2019 31270199 GenBank