Protein

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Genbank accession
UAW59058.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,70
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MTKARTLADFISDGSPLADGTISVSEVSGAAPLANPTFTGGIDVTGTIDSTDYLTAKGLRIGLDNNNDIYAGNNPIRSTADSFYFKQTSTGEEFIRFEHPNVVVNEFGYDHDFRVEGTSDSNVLAVNAGNNRVGVGTNGGLHKLSVLHTGTALGGVAHFSIGSAAAAYATTVFRVDDVDNNFAIDQNYASQDRNRLFIKRANGYVGIGGVTSPSAMLHVESNGSGNYAAVVRHTQATNPNGLWINYSNSGYIDTYALRISNTDGVIWDQRGTGSLMHYAQDGATVRFNTGAANVDFQVKSDSQSNAFFVDASTGEIVTNTYGFNIYNYDDGPNLNISSGRDYNSLMMGAAANYGSNNSTENKWSWNWRGRPASSSEHYNFLYDEIGNQEYFRVQADVSQYAVVVNDGGHNHDFRVESDNQSHCFFVNAGNDTVNIGSSLQQNTKLTVYAKDSGTTANWGEGEYTGISVGIANTVGRIGGIGFTNVDSAGGDMYCGIGAVMTSGGGVGIADLVFWAKANGSNVPSLERMRIEGASGHVVINEQSYDQDFRVESDSNANQFVVDAGQGMVGFGRSSPASANAGVKGISIYDGASAGISIESGQYSQNWLTWVNSGGSYEWYNETGNVARMTLSIGGALLNSANSYGALSDQRIKQDIVAASSQWDDVKAIQVKNYRLIADVENQGDAAPNLLGVIAQDLEASGMGGLVDDGSRTVPDGNGIITGPQEETKSVKYSILYMKAVKALQEAMDRIETLEAKVTALENA
Physico‐chemical
properties
protein length:763 AA
molecular weight: 81219,70080 Da
isoelectric point:4,64292
aromaticity:0,09305
hydropathy:-0,31769

Domains

Domains [InterPro]
DC_0421
STR
380–763
DC_0421
IPR030392
CHP
647–699
IPR030392 Coil
IPR030392
CHP
647–757
IPR030392
UAW59058.1
1 763
Architecture
STR
STR 380-763
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UAW59058.1
1 763
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,8558
Central domain 28 226 200 0,1676
C-terminal 227 763 536 0,9265
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-27
Central
28-226
C-terminal
227-763

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-235
[NCBI] 		2873406 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UAW59058.1 [NCBI]
Genbank nucleotide accession
MZ892989.1 [NCBI]
CDS location
range 27893 -> 30184
strand -
CDS
ATGACAAAAGCACGGACACTAGCCGACTTTATATCAGACGGTAGCCCACTGGCAGATGGTACTATTAGTGTATCGGAAGTGTCTGGTGCTGCCCCATTAGCTAACCCTACGTTTACTGGCGGCATTGATGTTACAGGTACTATCGACTCTACAGACTACCTCACTGCAAAAGGTCTTCGTATTGGCTTAGACAACAATAACGATATTTATGCAGGCAATAACCCAATACGATCTACGGCAGACTCTTTTTACTTTAAGCAAACTTCTACAGGTGAGGAGTTTATAAGGTTTGAACACCCCAATGTGGTGGTAAATGAGTTTGGCTATGATCACGACTTCCGTGTTGAAGGGACTTCTGACTCTAACGTATTAGCAGTAAATGCGGGTAACAACAGGGTAGGTGTGGGTACTAATGGCGGCTTACATAAGCTGAGTGTACTTCACACAGGTACGGCTCTTGGTGGCGTGGCGCATTTCTCCATTGGTTCCGCTGCGGCAGCATACGCTACAACTGTGTTCAGAGTTGATGATGTTGATAACAACTTTGCAATAGACCAGAACTATGCAAGCCAAGACCGCAACAGGTTATTTATTAAGCGTGCTAACGGATATGTTGGTATCGGCGGGGTCACTTCGCCTTCCGCAATGTTACACGTTGAGTCTAACGGTAGCGGTAATTACGCCGCCGTAGTCAGACACACGCAAGCGACGAACCCTAATGGCCTTTGGATTAACTATTCTAATTCAGGCTATATTGATACTTATGCGTTGAGAATTTCCAACACCGATGGTGTTATTTGGGACCAGCGTGGGACAGGTAGCCTGATGCACTACGCACAAGATGGCGCAACAGTTAGATTTAATACTGGTGCCGCAAACGTAGATTTTCAGGTAAAAAGCGACTCTCAAAGTAATGCGTTTTTTGTAGATGCAAGCACAGGTGAGATCGTTACAAACACCTATGGTTTCAATATCTACAATTACGATGATGGCCCTAATTTAAATATTTCAAGCGGCAGAGACTATAACAGCCTGATGATGGGCGCTGCGGCAAACTACGGTTCGAACAATAGTACAGAAAATAAATGGTCATGGAATTGGCGAGGTCGCCCTGCTTCAAGTTCAGAGCATTACAATTTCTTGTATGACGAAATCGGCAACCAAGAATATTTCCGAGTTCAAGCGGATGTGTCACAATATGCGGTTGTTGTTAATGACGGTGGTCATAACCACGACTTCCGTGTAGAGAGTGACAACCAATCTCATTGCTTTTTTGTAAATGCAGGCAACGATACTGTTAACATTGGATCAAGCTTACAACAAAACACAAAACTTACTGTATATGCAAAGGATAGCGGAACCACTGCAAACTGGGGTGAAGGCGAATACACTGGAATATCAGTAGGAATTGCAAATACCGTAGGGCGAATAGGCGGAATTGGCTTCACAAACGTAGACTCCGCAGGTGGCGATATGTACTGCGGCATAGGCGCTGTGATGACATCTGGCGGCGGTGTTGGTATAGCCGACTTAGTGTTTTGGGCTAAAGCCAACGGCTCCAATGTACCTTCTTTGGAAAGAATGAGAATTGAAGGAGCTTCCGGTCACGTTGTTATTAACGAACAGAGTTATGACCAAGACTTCCGTGTTGAGAGTGACAGCAACGCTAATCAATTTGTGGTGGATGCGGGGCAGGGGATGGTCGGTTTTGGTCGTTCAAGTCCAGCTAGTGCAAATGCGGGTGTTAAAGGCATATCAATATATGATGGCGCATCCGCAGGTATTAGCATCGAGAGTGGGCAATATAGTCAAAATTGGCTGACTTGGGTTAATTCTGGTGGCTCTTATGAGTGGTACAATGAGACGGGCAATGTTGCGAGAATGACACTATCTATTGGCGGTGCTCTCCTAAACTCGGCTAACTCTTATGGGGCGCTTTCAGACCAAAGAATAAAACAAGATATAGTGGCGGCCAGTTCGCAATGGGATGATGTGAAAGCGATACAAGTAAAAAATTATCGTTTAATTGCAGATGTTGAAAATCAAGGTGATGCTGCTCCAAATCTTTTGGGTGTTATTGCTCAAGACCTAGAGGCGTCTGGCATGGGCGGGTTGGTTGATGATGGCAGCCGCACTGTTCCAGATGGAAATGGAATAATAACAGGGCCGCAAGAAGAAACAAAATCTGTTAAATATTCCATCCTCTACATGAAAGCAGTCAAAGCATTGCAGGAGGCAATGGATCGGATTGAAACGCTAGAGGCAAAAGTAACTGCCCTCGAAAACGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b3c536336bd75fbda7de424783f38c054378c0200c4973236f54cd2c279bcd2a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6246
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Newly identified HMO-2011-type phages reveal genomic diversity and biogeographic pattern of marine HMO-2011-type group Qin,F., Du,S., Zhang,Z., Ying,H., Wu,Y., Yang,M. and Zhao,Y. 2022-01-12 — GenBank