Protein

View in Explore
Genbank accession
XYH45014.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MNYLFYLATSNIQSWQKNAFPEFYPEMPGGYRKNTHVYYNEKVFRSLISGNTKVPGTDKTAWEEQVTQAEILAAAPMPYGGAAGPSAAVIATPVDFNTITRSTIIIPSWDILVGCQNRPPVISQAGAVVESLVIVNTDNTTKNGMQRVETFSGEVWTRSFNNSATATDWELQVSSRQVQNNAFNYASATGPANNYAANMVPPVKAYQAGQKFTLVFDNATVTNTGPATININGLGRVNISSLKGVDLVPGMIKAGVIAEIMILSSSSCYLTSIVGSTVAAYQGEVPLAALSMGIEHALVPIGVPMPIPTTILPSNYLKGNGQSFSATVFPELAKVYPSLRVPDLRACGLRGLDDGRGIDVNRQILTEQADSIKSHAHTGSTQQAGGHVHAAYVTTYGEHTHTGATSTNGNHQHGGSTSASGDHQHFSGWGEAPNVARGPWGDDGSWSHAGSRATDWDNAWWLTSPNGNHVHSFATTWNGDHNHSFTTTTVGSGHGHTIGMDQAGVHVHSFTTDAFGAAETVNRNVSVIWAVRAK
Physico‐chemical
properties
protein length:534 AA
molecular weight: 56968,63030 Da
isoelectric point:6,29864
aromaticity:0,08614
hydropathy:-0,23315

Domains

Domains [InterPro]
DC_1737
ATT
1–70
DC_1737 DC_0310
IPR051934
Unmapped
156–532
IPR051934
IPR037053
ATT
298–350
IPR037053
SSF88874
STR
298–497
SSF88874
IPR011083
ATT
302–345
IPR011083
XYH45014.1
1 534
Architecture
ATT
STR
ATT
STR
ATT 1-70 | STR 112-297 | ATT 298-350 | STR 351-534
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF39
[NCBI] 		3446107 No lineage information
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH45014.1 [NCBI]
Genbank nucleotide accession
PV834959 [NCBI]
CDS location
range 67468 -> 69072
strand -
CDS
ATGAACTATCTGTTCTATCTGGCGACTTCGAATATTCAAAGCTGGCAGAAAAACGCATTCCCGGAATTTTACCCCGAAATGCCCGGCGGTTATCGAAAGAACACTCATGTTTATTATAACGAAAAAGTGTTCCGCTCTCTTATTTCCGGAAACACCAAAGTTCCGGGAACAGACAAAACCGCTTGGGAAGAGCAGGTGACGCAAGCCGAAATTCTCGCGGCCGCGCCCATGCCTTATGGTGGAGCTGCTGGGCCTTCTGCTGCTGTCATTGCGACACCGGTTGACTTCAACACTATCACCAGATCGACAATCATCATTCCTTCTTGGGATATTTTGGTTGGATGCCAAAACCGCCCTCCGGTGATCTCTCAAGCTGGGGCCGTGGTCGAATCTTTGGTGATCGTCAATACCGACAACACCACCAAAAACGGAATGCAAAGAGTCGAGACATTTTCCGGAGAAGTATGGACTCGATCCTTTAATAACTCTGCGACCGCCACTGATTGGGAACTTCAGGTTTCCTCTCGACAGGTTCAGAACAACGCATTCAACTACGCAAGCGCGACAGGCCCGGCAAACAACTACGCCGCGAACATGGTTCCGCCGGTAAAAGCTTATCAGGCTGGACAAAAGTTCACTCTCGTATTTGATAATGCGACAGTCACCAACACCGGCCCGGCGACTATCAATATTAACGGCCTTGGACGAGTAAATATCAGCTCTTTGAAAGGTGTCGATCTTGTTCCGGGTATGATCAAAGCTGGCGTAATCGCCGAAATCATGATCCTTTCGTCTTCGTCCTGTTATCTGACGTCGATTGTCGGTTCTACAGTAGCGGCTTATCAAGGCGAAGTGCCTCTTGCCGCGCTCTCGATGGGTATAGAACACGCGCTTGTTCCGATCGGCGTTCCGATGCCTATCCCGACGACGATTCTTCCGTCGAACTATTTGAAAGGGAACGGACAAAGCTTTTCAGCGACAGTATTCCCGGAACTGGCGAAAGTGTATCCGAGCTTGAGAGTCCCGGATCTTCGCGCTTGCGGTCTTCGTGGGTTGGATGATGGTCGCGGGATAGACGTCAACCGCCAGATCCTTACAGAACAAGCGGATTCGATCAAGTCACACGCCCACACCGGGAGCACTCAGCAGGCTGGCGGCCACGTACACGCGGCATACGTTACGACCTACGGAGAACACACCCACACCGGGGCGACGAGCACGAATGGTAATCACCAACACGGCGGATCGACTTCTGCTTCTGGGGATCATCAGCACTTTTCCGGATGGGGCGAAGCACCGAACGTCGCTCGCGGCCCATGGGGTGATGATGGCTCTTGGAGTCATGCCGGTTCTCGGGCGACAGACTGGGACAACGCTTGGTGGCTCACCTCACCGAACGGGAACCACGTTCACAGCTTCGCCACCACATGGAACGGAGATCACAACCACTCGTTCACGACGACAACGGTCGGCTCTGGACATGGACACACGATCGGAATGGATCAGGCCGGGGTGCATGTTCACTCGTTCACAACCGACGCTTTCGGCGCGGCCGAAACTGTTAACCGTAACGTTTCCGTAATCTGGGCGGTAAGGGCGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bd1766a73cfe06211e7691295ed276c057e79140605a3001244daf823d0ef12c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7475
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50