Protein

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Genbank accession
QBX30344.1 [GenBank]
Protein name
hyaluronate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTGQLRLKPNSGIEKSSSTGGAINIDMSKSKGAAMVMYTNKDTTDGPLMILRSNKDTFDQSVQFVDYRGKTNAVNIVMRQPPTPNFSSALNITSANEGGSAMQIRGVEKALGTLKITHENPSVDKEYDKNAAALSIDIVKKKKGGGDGTAAQGIFINSSSGTTGKLLRIRNKNEDKFYVNPDGGFHSYADSIVDGNLTVKNPTSGKHAATKDYVDKKFDELKKLIQKTD
Physico‐chemical
properties
protein length:229 AA
molecular weight: 24683,55810 Da
isoelectric point:9,44599
aromaticity:0,05677
hydropathy:-0,62445

Domains

Domains [InterPro]
SSF69349
STR
1–226
SSF69349
IPR009860
STR
19–186
IPR009860
QBX30344.1
1 229
Architecture
STR
STR 1-226 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX30344.1
1 229
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0033
Central domain 11 209 200 0,1674
C-terminal 210 229 19 0,9900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-229

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan532
[NCBI] 		2548245 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pyogenes SSI-1
[NCBI] 		193567 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus pyogenes

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX30344.1 [NCBI]
Genbank nucleotide accession
MK448978 [NCBI]
CDS location
range 31519 -> 32208
strand +
CDS
GTGACAGGACAACTACGGCTTAAACCTAATAGTGGTATTGAGAAGTCATCTTCTACAGGAGGAGCGATTAACATTGATATGTCTAAATCGAAAGGTGCTGCTATGGTGATGTATACAAATAAAGATACTACTGATGGACCATTGATGATTTTACGTTCTAACAAAGATACGTTTGATCAGTCAGTTCAATTTGTGGACTACAGAGGTAAGACTAATGCTGTAAATATTGTAATGCGTCAGCCACCCACCCCCAATTTTTCCTCGGCACTTAATATAACCAGTGCTAACGAAGGCGGTAGTGCGATGCAAATTAGAGGCGTCGAAAAAGCATTGGGAACGCTCAAAATCACACACGAAAACCCAAGCGTTGACAAAGAATACGATAAAAACGCTGCAGCGTTATCTATTGATATCGTTAAAAAAAAGAAAGGCGGTGGAGATGGTACTGCTGCACAAGGCATTTTCATCAATTCATCCTCAGGCACGACAGGGAAGCTGCTTAGGATTAGAAATAAAAATGAAGACAAATTTTATGTAAATCCAGATGGTGGCTTTCACTCATATGCAGATTCAATCGTGGATGGTAATCTAACAGTTAAAAATCCAACATCTGGAAAACATGCTGCGACTAAAGATTACGTAGATAAAAAATTTGATGAGTTAAAAAAACTCATACAAAAAACAGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7ccde41cc0f828c005395034a9dca7117d035843fc237795fb2f3dad1e119679
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7234
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank