Protein

Genbank accession
YP_006383332.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,56
Protein sequence
MALFTMLNVVSSRTDLTKIDYKDVEFFSGVEGDSKYHWILGISNTALSSRINYLDKLTVGTIAPTWTFNGVITDAYESGLITPVTDDSQVLLLTEVISFKVNEFGGVGIINGNMSSTTSSSGGGSVYLSNDFHLYLIYHGIVSNVKITTEELIVGQEYTLIIHRDWNSTNKETTVLLDGEVIFDNVSTSTYITTDRKLGLGNCYYNTGNTPEIEFSEMVVFNKQFDAEGLALLNAKAKSRINSRT
Physico‐chemical
properties
protein length:245 AA
molecular weight: 27040,06170 Da
isoelectric point:4,73653
aromaticity:0,10204
hydropathy:-0,02204

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Halocynthia phage JM-2012
[NCBI] 		1173297 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Halocynthia roretzi
[NCBI] 		7729 Eukaryota > Metazoa > Chordata > Tunicata > Ascidiacea > Stolidobranchia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006383332.1 [NCBI]
Genbank nucleotide accession
NC_017975 [NCBI]
CDS location
range 50249 -> 50986
strand -
CDS
ATGGCATTATTTACAATGTTAAATGTAGTTAGTTCTAGAACGGACTTAACTAAAATAGATTACAAAGATGTAGAATTCTTTTCTGGAGTTGAAGGAGATTCTAAATATCATTGGATATTAGGTATATCAAACACAGCACTTAGTAGTCGTATAAACTACCTAGATAAATTAACGGTAGGTACTATAGCTCCGACATGGACATTTAATGGAGTTATAACAGACGCATATGAATCTGGCCTTATAACACCAGTAACCGATGATAGTCAAGTCTTACTATTGACTGAGGTTATTAGTTTTAAAGTTAATGAGTTTGGTGGGGTCGGTATTATCAATGGTAATATGTCGTCTACAACAAGTTCATCTGGCGGTGGTAGTGTATACTTAAGTAATGATTTCCATCTGTACCTAATATATCACGGTATAGTTTCTAATGTTAAAATCACTACCGAAGAACTTATCGTAGGTCAGGAGTATACGTTAATTATTCATCGTGATTGGAATAGTACTAATAAAGAAACCACTGTATTGTTAGACGGTGAAGTTATATTTGACAACGTTAGTACTAGTACGTATATCACCACTGATAGAAAGTTAGGTTTAGGTAATTGCTATTATAACACAGGTAATACTCCAGAAATCGAGTTTTCAGAAATGGTTGTTTTTAATAAACAATTCGATGCTGAGGGATTGGCTTTATTAAACGCTAAAGCTAAATCAAGAATTAACTCAAGAACTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
f34e7cde9c85be6110488b44ba81765f8c2f2acf6f6d636ce5af5ad04c940abd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8296
Evidence 0,8296
Download PDB

Literature

Title Authors Date PMID Source
Bacteriophage from diseased seasquirt, Halocynthia roretzi, showing soft tunic syndrome Mun,J.Y., Jang,H.N., Ha,M.A., Nho,S.W., Cha,I.S., Park,S.B., del Castillo,C.S., Jung,C.Y., Kim,Y.K., Kim,Y.R., Aoki,T.T. and Jung,T.S. 2012 — GenBank