Protein

View in Explore

Genbank accession

QNH71621.1 [GenBank]

Protein name

central tail fiber J

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,51

Protein sequence

MIKILSHGDTALATQEIVNAQPARIRGFKGSSKGGKVTNDGNTLRSRANFRLVEAVSEGPIWGLVDGAKSIYFDQTPLLNDDGTYNFKNISVSSHKGLPDEGYFNGHTAVETPVNVEVQVKNSLGPVVRTIVDENVDAVRVIMRIPSLVHQDSKGGLKKTSVSYAIDVRANNGGWNQVVLQNLDNEKTLSPFQIDHRVPLPLNGAPWDVRVRRLTADTTDDKLQNDTIWESYVELVEGKFIYPNTAAFAISGSAEQMGSNIPPRSYHIRGLLVNVPSNYNPLTRAYTGIWDGTFKIAWTNNPAWVFYDLLINDRYGLGEFIKPDIVDKWSLYTIAQYCDQLVKSGFKNGDTGADLYEPRYTFNGVINTKDEAFFVLQSITKAWRGMGYWALGQVFATADMPQDPVRLVTPANVIGGEFEYGGTALKARHSVVMVKWNNPDDFYRPDTEVVIDSELLHKYDWRDKTLQLTGCTSRGLAHRYGKWVIDTEQHETDTLTYQASWDHAELRPGEIIAVSDPRKALIRAGGRIVDHSGLTVTLDADFEYTEGETYQLMLTLPSGQVETKPILAFLDARTVRLSTGFSAEAQPDAMWTIKGTDITPRLYRVISVDETDTNVFKITALFHDPLKYARIEKDIVFEPLPYDRPDKKAVPPSNLIVRETGYVTGGQTFHSLTVSWSPPPNTLVRGFVVAVDAPDGESFVVGSTNETFMELLTTRGGTYKFYVQTITYTGLVSDPATIEFEAVGPEGYPIPTVTDLELVDDPTTSNFTGTDLRVRWKNNFALSANGALEHVASPHYSHNTVNVYHNGTGALLRSERITSETYTYDLGSNRADCKKLGYSTPTRSVRIEVSVTDVFARTSNEVDRVFTNPVPQAIAPSYTVAASTIFLGFNQPADPDYAGYVLLRSKVSGIDITDEPYYDGQANPLTIPGEPNTTYYFRIAAYDAFGKTGLNWSTEFEIATHTDSVDFEPPAVPTGLAATSVIRADGMVDVTYTWDANTEGDLMGYIVQIKEGAGNYIGFSAPSPALKVTVLPTTLLTAQVLAYDTNGNRSNFSDPPLIYTASRDELPPAVPSNWTARGGFGLVVLSGDPNTELDFSHYEIYQSTVDTAPDAATPATLVASSNQFFITDLDDELTLYFWLRSVDGSGNKSDWSDRLVATTVSSNVLLTTEALEGLVDRTSFATSIEPPGIGSTLPDLPFTNETPKQFFLTTEGKMYIQKVDGSGWVLTTSTTILDGKIVTGQIAAGAIGADQIAAGAITTKNLSIRDFTILAENADMQLGNTVGWASGKERIIQDAANAYPGQTWVAALTGTTTLIVTNALEVSCVAGERFYLSAHVKTVGNAGAGRKGVRAQFIDKDGNLLTPGTADTTGNPTAWTAVVGFATAPADTAKVRLEVINYNNVGGTCYVANPRLMRAAAVLIEPNGITADKLTTGELITLSAQIKDAIITSAKVFDLDAAKIRAGTIMAGTITVNGSQLGIIKNNAELGATDPTTRINSGTTTINGGKVTISNTGVLSDWAMGGDSTEINGGAVAANTLTANKLTIGQRGINLENIQFSYDKATGIVSWTAGVLRYTRTNATTLAPEVGFVNISAGTATWTTGRLYVYWDKGATDPANGAAVTLLASNVVATANGDNKLVLATYSGGTMFVANYGQTIIDGGTIRAQSIDAAQIKANAITAGLIAADAIETRHLKSQIITAKQMVMYDAQNWVSNGEFEELDTEATWTFGGGNISPQFSGLDTGSMFYLSTEGSQTGRYVLALDRKSSSYGTNLNVNMKNKFQVTSGSTLTVSVAFGSLNAASTAGFYITLYWYDSDGVQTTSTFLWNNSSIPATITEQTKKIVVPAGATYCHLRITHGAGSTEPVIYVDRVAVRKANAASLIVDGGIKANHIDVDNLSALNIKVGNIDIDTGTIGGEKLTNGAISDVYVDSSGSSIYLNGSSNILVRNIAVKATERLLFTGFWNIRSFIDFDTEICWYGYAQIVVNGTVIAQTMIVGPAIDGYTCANQSMSGACIIGSDQTVTCIFRFVIGSGGTPRSGSYNNGALAQNPMSNDGVSWSIIRAKK

Physico‐chemical properties

protein length:	2064 AA
molecular weight:	222770,08660 Da
isoelectric point:	5,01550
aromaticity:	0,09109
hydropathy:	-0,12892

Domains

Domains [InterPro]

IPR053171
Unmapped
24–759

IPR053171 DC_1241 IPR013783 IPR003961 DC_1605 G3DSA:2.60.120.260 DC_1507

DC_0129
STR
37–828

DC_0129 IPR013783 DC_0960 G3DSA:2.60.120.260

IPR055385
ATT
110–237

IPR055385 IPR032876 IPR003961 IPR003961 IPR013783

IPR003961
STR
651–747

IPR003961 IPR036116

IPR036116
STR
667–738

IPR036116 IPR003961

QNH71621.1

1 2064

Architecture

STR

ATT

STR

ATT

STR

ATT

STR

RBD

STR 37-109 | ATT 110-237 | STR 238-374 | ATT 375-523 | STR 524-828 | ATT 863-967 | STR 968-1168 | STR 1188-1421 | STR 1707-1879 | RBD 1880-2064

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	24	759	InterPro	Viral Tip Attachment Protein	-	-	-	-
DC_0129	STR	DC_0129	37	828	Novel HMM	DC_0129	Central	Low	Positional only	234 proteins / 234 hits
IPR055385	ATT	DC_0360	110	237	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	375	523	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR003961	STR	DC_0003	651	739	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	651	747	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR036116	STR	IPR036116	667	738	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
DC_1241	ATT	DC_1241	863	967	Novel HMM	DC_1241	N-terminal	Low	Positional only	68 proteins / 68 hits
IPR013783	STR	IPR013783	870	966	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003961	STR	DC_0003	870	963	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR036116	STR	IPR036116	879	1060	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR003961	STR	DC_0003	880	960	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR013783	STR	IPR013783	969	1063	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
DC_0960	STR	DC_0960	981	1168	Novel HMM	DC_0960	Central	Low	Positional only	21 proteins / 21 hits
IPR003961	STR	DC_0003	1067	1162	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR013783	STR	IPR013783	1067	1166	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
DC_1605	STR	DC_1605	1188	1421	Novel HMM	DC_1605	Central	Low	Positional only	12 proteins / 12 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1266	1417	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1707	1879	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
DC_1507	RBD	DC_1507	1879	2064	Novel HMM	DC_1507	C-terminal	Low	Positional only	5 proteins / 5 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Rhizobium phage V1VFA-S [NCBI]	2763532	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

QNH71621.1 [NCBI]

Genbank nucleotide accession

MT778838.1 [NCBI]

CDS location

range 56413 -> 62607
strand +

CDS

GTGATCAAGATCCTCTCCCACGGCGACACCGCGCTCGCGACCCAGGAAATCGTCAACGCCCAGCCGGCGCGTATTCGCGGCTTCAAGGGCAGCAGCAAGGGCGGCAAGGTCACGAACGATGGCAACACGCTGCGTTCGCGTGCAAACTTCCGGCTCGTCGAGGCTGTCTCGGAAGGTCCGATCTGGGGCCTCGTCGATGGCGCCAAGTCGATCTACTTCGACCAGACGCCGCTCCTCAACGACGACGGCACCTATAACTTCAAGAACATCTCGGTCTCGTCGCATAAGGGTCTGCCTGACGAAGGCTATTTCAACGGCCACACGGCAGTCGAGACGCCGGTAAACGTCGAGGTCCAGGTCAAGAATTCGCTTGGCCCGGTGGTGCGCACCATTGTCGATGAGAACGTCGACGCCGTGCGCGTCATCATGCGCATTCCCTCGCTCGTCCACCAGGACAGCAAGGGCGGCCTGAAGAAGACCTCGGTTTCCTACGCGATCGATGTGCGCGCCAACAATGGCGGCTGGAACCAGGTCGTCCTGCAGAATTTGGACAACGAGAAGACGCTCTCGCCGTTCCAGATCGACCACCGTGTTCCCCTGCCGCTGAATGGCGCTCCTTGGGATGTTCGCGTGCGTCGTCTGACGGCCGACACGACCGACGACAAGCTTCAGAACGACACCATCTGGGAGAGCTACGTCGAGCTTGTCGAGGGCAAGTTCATCTACCCGAACACGGCTGCTTTCGCGATCTCCGGCTCTGCTGAGCAGATGGGCTCGAACATCCCGCCGCGGTCCTATCACATCCGCGGCCTGCTGGTGAACGTTCCGTCGAACTACAACCCGCTGACGCGCGCCTATACCGGCATCTGGGACGGCACCTTCAAGATCGCCTGGACGAACAATCCGGCGTGGGTGTTCTACGATCTGCTGATCAACGACCGCTATGGCCTTGGTGAATTCATCAAGCCCGACATCGTTGACAAGTGGTCGCTCTACACCATCGCGCAGTATTGCGACCAGCTCGTCAAGTCCGGCTTTAAGAACGGCGACACGGGCGCGGATCTCTACGAGCCTCGCTACACTTTCAACGGCGTCATCAACACCAAGGATGAAGCCTTCTTCGTGCTGCAGTCGATCACGAAGGCATGGCGCGGCATGGGCTATTGGGCGCTCGGCCAGGTCTTTGCGACCGCTGACATGCCGCAGGATCCTGTGCGCCTGGTCACGCCGGCAAACGTCATCGGCGGAGAGTTCGAATATGGCGGGACGGCGCTAAAGGCACGGCACTCCGTCGTCATGGTCAAGTGGAACAATCCGGACGACTTCTACCGCCCGGACACCGAAGTCGTCATCGATAGCGAGCTGCTCCACAAGTATGACTGGCGCGACAAGACGCTCCAGCTCACCGGCTGCACCTCGCGCGGCCTCGCGCATCGTTACGGCAAGTGGGTAATCGACACCGAGCAGCACGAGACCGACACGCTCACCTATCAGGCGAGCTGGGATCATGCCGAGCTTCGGCCTGGCGAAATCATCGCTGTCTCGGATCCTCGCAAGGCGCTGATCCGCGCGGGCGGCCGCATTGTCGACCACAGCGGCCTGACGGTCACGCTCGATGCGGACTTCGAATATACCGAGGGCGAAACCTATCAGCTCATGCTGACGCTGCCGTCGGGTCAGGTCGAGACCAAGCCGATCCTGGCGTTCCTTGATGCTCGCACCGTTCGCCTCTCCACTGGCTTCTCTGCTGAAGCTCAGCCCGATGCGATGTGGACGATCAAGGGCACCGACATCACGCCGCGGCTCTATCGTGTTATCTCCGTCGATGAGACGGACACCAACGTCTTCAAGATCACGGCACTGTTCCACGATCCGCTGAAGTATGCGCGCATCGAGAAGGACATTGTATTCGAGCCGCTGCCTTACGATCGGCCGGACAAGAAGGCTGTTCCGCCTTCGAACCTCATCGTGCGCGAGACCGGCTATGTCACGGGCGGCCAGACCTTCCATTCGCTGACGGTCTCCTGGAGCCCGCCTCCGAATACGCTGGTGCGCGGCTTCGTCGTAGCTGTCGATGCGCCGGACGGCGAGAGCTTCGTCGTTGGCTCGACCAACGAAACCTTTATGGAGCTGCTCACCACGAGGGGCGGCACCTACAAGTTCTATGTTCAGACGATCACCTACACCGGCCTGGTGTCGGATCCTGCGACCATCGAATTCGAGGCAGTCGGCCCGGAAGGCTATCCGATCCCGACCGTCACCGACCTGGAACTGGTTGACGATCCCACGACCTCGAACTTCACTGGCACGGACCTCCGGGTCCGGTGGAAGAACAACTTCGCGCTGTCGGCTAACGGCGCTCTCGAGCACGTCGCCTCGCCGCACTACAGCCACAACACGGTCAACGTCTACCACAACGGCACGGGCGCGCTGCTGCGCTCCGAGCGCATCACGTCTGAGACCTATACCTACGATCTCGGTTCGAACCGCGCCGACTGCAAGAAGCTGGGCTATTCGACCCCGACCCGCTCTGTCCGCATTGAGGTCAGCGTAACCGACGTTTTCGCCCGCACCTCGAATGAGGTCGATCGGGTCTTCACGAACCCGGTCCCGCAGGCGATCGCGCCGAGCTACACCGTTGCCGCATCCACGATCTTCCTCGGCTTCAACCAGCCGGCCGATCCCGACTACGCCGGCTATGTGCTTCTGCGCTCGAAGGTCTCGGGCATCGATATAACCGATGAGCCCTATTACGACGGCCAGGCCAACCCGCTGACCATTCCGGGCGAGCCGAACACGACCTATTACTTCCGCATTGCCGCATACGACGCCTTCGGCAAGACGGGTCTCAACTGGTCGACGGAATTCGAAATTGCCACGCACACCGACAGCGTCGACTTTGAGCCGCCTGCGGTGCCGACCGGCCTCGCCGCGACTTCGGTCATTCGTGCCGACGGCATGGTGGATGTCACCTACACCTGGGATGCCAACACCGAAGGCGACCTGATGGGCTACATTGTCCAGATCAAGGAAGGTGCGGGTAACTACATCGGCTTTTCTGCGCCGTCGCCGGCGCTGAAGGTCACGGTGCTGCCGACGACCCTGCTGACCGCCCAGGTGCTCGCTTACGACACCAACGGCAACAGGTCGAACTTCAGCGATCCTCCGCTCATCTATACGGCGAGCCGGGATGAGCTGCCGCCCGCTGTTCCGTCGAACTGGACCGCGAGGGGTGGTTTCGGCCTCGTCGTGCTTTCGGGCGATCCGAATACCGAACTGGATTTCTCCCACTACGAGATCTACCAGAGCACGGTCGACACTGCGCCTGACGCTGCAACGCCCGCTACGCTGGTCGCCAGCTCCAATCAGTTCTTCATCACCGACCTCGACGACGAGCTGACGCTCTATTTCTGGCTGCGTTCGGTCGATGGTAGCGGCAACAAGTCGGACTGGTCCGATCGCCTGGTCGCGACCACGGTCTCTTCGAACGTTCTGCTGACCACCGAGGCTCTCGAGGGCCTGGTCGACCGGACGAGCTTTGCGACCTCGATTGAGCCGCCTGGCATCGGTAGCACTCTGCCGGACCTGCCCTTTACCAACGAGACGCCGAAGCAGTTCTTCCTGACTACCGAAGGGAAGATGTATATCCAGAAGGTCGACGGATCCGGCTGGGTGCTGACCACCTCGACCACCATCCTCGACGGCAAGATCGTCACCGGCCAGATCGCGGCAGGCGCGATCGGCGCGGATCAGATCGCGGCCGGCGCCATCACCACGAAGAACCTGTCGATCCGCGATTTCACGATCCTTGCGGAAAATGCAGACATGCAGCTCGGCAACACTGTCGGCTGGGCGAGCGGTAAGGAACGCATCATCCAGGACGCGGCGAATGCCTATCCGGGCCAGACCTGGGTGGCAGCGCTGACGGGCACTACCACCCTCATCGTGACCAACGCTCTCGAGGTGTCGTGCGTCGCCGGGGAGCGCTTCTATCTGTCCGCACATGTCAAGACCGTCGGAAACGCTGGCGCCGGCCGCAAGGGCGTGCGTGCTCAGTTCATCGACAAGGACGGCAATCTGCTGACGCCTGGCACGGCTGACACGACCGGCAATCCGACGGCCTGGACTGCCGTTGTAGGCTTTGCGACTGCGCCTGCAGACACGGCCAAGGTTCGGCTCGAGGTCATCAACTACAACAACGTGGGCGGCACCTGCTATGTCGCCAACCCGCGCCTGATGCGTGCAGCCGCGGTTCTGATCGAGCCGAACGGCATCACGGCCGACAAGCTGACGACTGGCGAACTGATCACGCTCTCGGCGCAGATCAAGGATGCCATCATCACCAGCGCCAAGGTCTTCGACCTCGACGCGGCCAAGATCCGGGCTGGCACCATCATGGCCGGGACCATCACGGTCAACGGTTCGCAGCTCGGCATCATCAAGAACAATGCCGAACTCGGCGCGACCGATCCGACGACCCGCATCAACTCGGGCACGACGACTATCAACGGCGGAAAGGTCACGATCTCCAACACCGGCGTCCTGAGCGATTGGGCGATGGGTGGCGACTCGACCGAGATCAACGGTGGCGCCGTAGCGGCAAACACCCTGACGGCCAATAAGCTGACGATCGGCCAGCGCGGCATCAACCTCGAGAATATCCAGTTCTCCTACGACAAGGCAACTGGTATCGTCTCGTGGACGGCTGGCGTGCTGCGCTATACCCGCACCAATGCGACGACGCTCGCGCCTGAAGTCGGCTTCGTCAACATCTCTGCGGGCACCGCTACGTGGACCACGGGCCGCCTCTATGTCTATTGGGACAAGGGCGCAACGGATCCGGCCAATGGCGCGGCCGTCACGCTGCTTGCCAGCAACGTCGTGGCAACGGCCAACGGCGACAACAAGCTGGTGCTGGCAACCTATAGCGGTGGCACGATGTTCGTTGCCAACTACGGCCAGACGATCATCGACGGTGGAACCATTCGCGCACAGTCGATCGACGCGGCGCAGATCAAGGCGAACGCCATCACGGCCGGCCTGATCGCCGCGGATGCGATCGAGACGCGGCACCTGAAGTCGCAGATCATCACCGCAAAGCAGATGGTCATGTATGATGCCCAGAATTGGGTGTCGAATGGCGAGTTCGAAGAGCTCGACACTGAGGCTACCTGGACGTTCGGCGGCGGCAACATTTCGCCGCAGTTCAGCGGCCTCGACACGGGCAGCATGTTCTATCTGTCGACGGAGGGCTCGCAGACCGGCCGCTACGTTCTGGCGCTCGATCGCAAGAGCTCCTCGTATGGCACGAACCTGAACGTCAACATGAAGAACAAGTTTCAGGTGACCTCGGGATCGACTTTGACGGTCAGCGTTGCCTTTGGATCGTTGAACGCGGCAAGCACCGCAGGCTTCTACATCACGCTCTATTGGTATGACTCCGACGGCGTGCAGACGACCAGCACGTTCCTCTGGAACAACAGCTCCATCCCGGCGACGATTACCGAGCAGACGAAGAAGATCGTCGTGCCGGCTGGGGCCACCTATTGCCATTTGCGCATCACCCACGGCGCGGGCTCGACCGAACCGGTCATCTACGTTGACCGCGTTGCCGTTCGTAAGGCCAACGCTGCCAGCCTGATCGTGGACGGTGGCATCAAGGCCAACCACATCGATGTCGATAATCTGAGCGCCTTGAACATCAAGGTCGGCAACATCGACATCGACACTGGCACGATCGGCGGGGAAAAGCTCACCAACGGCGCGATCTCTGATGTCTATGTCGACAGCTCTGGATCGTCGATCTACCTTAACGGCTCATCGAACATCCTCGTTCGCAATATCGCCGTGAAAGCGACTGAGCGGCTCCTGTTCACCGGCTTCTGGAACATCAGGAGCTTCATCGACTTTGACACTGAAATCTGCTGGTATGGCTATGCCCAGATCGTCGTCAACGGCACTGTGATCGCCCAGACTATGATCGTCGGGCCTGCCATTGACGGATATACGTGCGCCAATCAGTCGATGTCCGGCGCTTGTATTATCGGGTCTGACCAGACTGTCACCTGTATTTTCCGTTTCGTCATTGGCTCAGGGGGCACGCCTCGCTCCGGCAGTTATAACAATGGCGCGCTCGCGCAAAATCCGATGAGTAACGACGGCGTGTCGTGGTCGATTATAAGGGCTAAGAAGTGA

Genome Context

Tertiary structure

PDB ID

322ca89988b294e6cdaee3ad8fc0a1689f3ca8276f03c274735419c166f3df50

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7164

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Complete genome sequence of Rhizobium leguminosarum bacteriophage vB_RlegS_V1VFA-S	Gunathilake,D., Mackenzie,K.D., Yost,C.K. and Hynes,M.F.	2025-10-09	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature