Protein

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Genbank accession
YP_009010284.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSDFDLTTLMEQAVRNPAGLQTVAIDYVQWRLDGLTVPDPLSPMVQIMEVGSTQTAIAINQALALDRRRYGLLATTWEDLYAVMTDRDFLNRFSKPAGMPLSIWVERDTVLSLMASVGNGSKKLTIPRYTEFTVSNQYTFTLLYPIEIRQLQHGAIQIGYNSDKLTPLQTLTDNVIPWWSSRDDEGVNRIRLDVNLLQLKRVYQLFSPMGGSANSFVMTFEDSYFSARVFRKINNAWVEMKTTHSEQIHDPQTATAFLEVDEGALRVTIPPIYLTNGLIPGDIRVDVYTTKGTLEVPLSQLDSAAYSWEFGEDLDDPSQAAFWKGLPDLSMAVFSEGIISGGTPGLTFEEARDLVISRGSSIDTPITPPQVRANLELQGFNVLLGRDDLTDRVYYATRGVPNNPNSEFTTSISSGIVPISISMENLARLPGCYDNGDRVTMTPKTLMRIESGRLQVVKAAEYPNSGTATTETLVAAVNNTEYVYSPFHYVLDASNSNFALRAYYLENPKMTLREFLAENQSTLLSVSTQTFAIERTTYGYRIVINCKPSTGYDAIKQDDVHLHLGYYPRGETELAYLTGTVLGIIDGVWTWEFQLHTNYDVDANDDLVLTNFLQYDTTPRNLTIGLETRFFLVNSVTNYRVLNLEGSDVDAYVPAFLLPSGVDWVGVQLEAMTFQLGTALTDFWRGCRPVAGSQQYQLYTQNVLKYYASDVYEMDPSTKRPKYTIVNGEMVYTKLHSKGDPVLDAVGNQEIEYYAGQVKVDDNGEPIVVSERPTLRLMDLFVMDGAYYFTDQKEALADAQYLPARIADTYVATIEQIAGRGLESTWYYYYPKTTIGQINVLTDSSRSLMMNSRVNGVCTLKLSELGYNNEEYQKSVSRVITDIINAHLKLETVSKMDIMADIKEKTDSDLIGCELYLYSNGVEVETISAGDEAVRFSLNRVLYLRDDGKLGVKEDMTFTPKPHITKSDSLYSTSINKLTQV
Physico‐chemical
properties
protein length:981 AA
molecular weight: 110059,99670 Da
isoelectric point:4,72732
aromaticity:0,10092
hydropathy:-0,21152

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009010284.1
1 981
Domain Start End Length (AA) Confidence
N-terminal 1 388 388 0,9576
Central domain 389 730 343 0,5545
C-terminal 731 981 250 0,1550
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-388
Central
389-730
C-terminal
731-981

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage PhiEaH1
[NCBI] 		1401669 Uroviricota > Caudoviricetes > Chimalliviridae > Iapetusvirus EaH1 >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009010284.1 [NCBI]
Genbank nucleotide accession
NC_023610 [NCBI]
CDS location
range 204719 -> 207664
strand +
CDS
ATGTCAGACTTCGATTTAACCACATTGATGGAGCAAGCCGTGCGTAACCCGGCGGGTCTCCAGACCGTGGCCATCGACTACGTCCAATGGCGACTCGACGGACTCACGGTACCGGACCCGTTGTCCCCCATGGTGCAAATCATGGAGGTCGGTTCAACCCAAACCGCCATCGCCATCAACCAGGCCCTGGCCCTGGACCGTCGTCGTTATGGGTTACTGGCCACCACCTGGGAAGACCTGTACGCGGTCATGACTGACCGTGACTTCCTTAACCGTTTCTCCAAACCGGCGGGGATGCCGCTCTCTATCTGGGTAGAACGCGACACGGTTCTTTCCTTGATGGCGTCAGTGGGGAACGGGTCGAAGAAGTTGACCATTCCACGCTACACGGAGTTCACGGTCTCCAACCAGTACACCTTTACCTTACTTTACCCGATTGAGATTCGCCAACTGCAACACGGCGCTATCCAGATTGGGTACAACTCGGATAAGCTGACGCCACTGCAAACGCTGACCGACAACGTGATTCCGTGGTGGAGTTCCAGGGACGATGAAGGGGTGAACCGTATTCGCCTTGACGTTAACCTGCTCCAGTTAAAACGGGTGTACCAGTTGTTCTCCCCGATGGGCGGTTCAGCCAACTCCTTCGTCATGACGTTTGAGGACAGCTACTTCTCTGCCCGCGTGTTCCGTAAAATCAACAACGCTTGGGTGGAGATGAAGACCACCCACAGTGAGCAGATTCACGACCCGCAGACCGCCACGGCGTTCCTGGAAGTAGATGAAGGCGCGTTGCGTGTCACCATCCCGCCTATCTACCTGACTAACGGGCTGATTCCGGGTGACATTCGTGTGGACGTCTACACCACCAAAGGAACCCTGGAAGTGCCGTTGAGTCAGTTGGACTCGGCTGCGTACAGCTGGGAATTCGGCGAAGACCTTGACGACCCGTCACAGGCGGCGTTCTGGAAAGGCTTACCTGACCTCAGCATGGCCGTGTTCTCCGAGGGTATCATTTCAGGCGGTACACCGGGTCTTACCTTTGAAGAAGCGCGTGACCTGGTGATTTCTCGTGGTAGCAGCATTGATACGCCTATCACCCCACCGCAGGTACGGGCGAACCTGGAACTTCAGGGCTTCAACGTCTTACTGGGTCGGGACGACTTGACGGACCGTGTGTACTACGCGACGCGGGGTGTGCCAAACAACCCGAACAGCGAATTCACCACGTCTATCTCGTCAGGGATTGTCCCCATCAGTATTTCGATGGAGAACCTGGCGCGGTTACCGGGTTGTTACGACAACGGCGACCGGGTGACCATGACGCCGAAGACGTTGATGCGTATTGAGAGTGGCCGGTTACAGGTTGTGAAAGCAGCTGAGTACCCGAACAGCGGTACAGCGACCACGGAAACGTTGGTGGCGGCCGTGAATAACACGGAGTACGTGTATTCGCCGTTCCATTACGTGCTGGATGCCAGCAACAGCAACTTCGCGTTACGGGCGTATTACCTCGAGAACCCGAAGATGACGTTGCGTGAGTTTCTGGCCGAAAACCAGTCAACGCTTCTCAGCGTCTCTACCCAGACCTTCGCCATTGAACGCACCACGTACGGTTACCGGATTGTGATTAACTGCAAACCGTCAACCGGTTATGATGCTATCAAGCAAGATGACGTTCACCTGCACCTCGGGTATTACCCGCGCGGGGAAACGGAACTGGCGTATCTGACCGGGACCGTGTTGGGGATTATCGACGGCGTCTGGACCTGGGAGTTCCAACTCCACACCAACTACGATGTGGACGCAAACGACGACCTGGTATTGACCAACTTCCTGCAATACGACACCACACCACGTAACCTGACCATTGGGTTAGAGACCCGTTTCTTCCTGGTGAACTCGGTGACCAATTACCGGGTACTGAACCTGGAAGGCTCGGATGTGGATGCGTACGTTCCAGCGTTCCTGTTACCGAGTGGGGTCGACTGGGTGGGTGTGCAGTTAGAAGCCATGACCTTCCAGTTGGGTACGGCACTGACGGATTTCTGGCGGGGTTGTCGTCCGGTTGCCGGGAGTCAGCAGTACCAACTCTACACCCAAAACGTGCTGAAGTACTACGCGTCGGATGTGTACGAGATGGACCCGAGCACCAAACGGCCGAAGTATACCATCGTCAATGGTGAGATGGTGTACACCAAGTTGCACTCGAAAGGGGACCCAGTACTGGATGCCGTGGGTAACCAGGAGATTGAGTACTACGCCGGACAGGTGAAGGTGGATGACAACGGGGAACCGATAGTCGTCTCAGAGCGTCCTACGCTGCGTCTGATGGACCTGTTCGTTATGGACGGGGCTTACTACTTCACAGACCAGAAAGAGGCGCTGGCTGACGCACAGTACCTTCCAGCGCGTATTGCCGATACGTACGTGGCAACCATCGAGCAAATCGCAGGACGTGGCCTGGAAAGTACCTGGTATTACTACTATCCGAAGACCACCATCGGGCAGATTAACGTGTTGACAGATTCTTCACGCTCTCTGATGATGAACTCTCGGGTGAACGGTGTTTGTACGCTGAAGCTTTCAGAGTTAGGCTACAACAACGAGGAATACCAGAAGTCAGTGAGCAGGGTGATTACGGACATCATCAATGCGCACCTGAAACTGGAAACGGTGTCGAAGATGGATATCATGGCCGACATCAAGGAGAAGACCGACAGCGACCTGATTGGGTGCGAGTTGTACTTGTACTCGAACGGGGTCGAAGTTGAAACCATCTCCGCCGGTGATGAAGCCGTCCGCTTCTCGCTGAACCGGGTTCTGTACCTGCGTGATGACGGTAAACTTGGCGTGAAGGAAGACATGACCTTTACACCGAAACCGCACATCACCAAGTCGGACTCGTTGTACAGCACCAGTATCAACAAACTGACGCAAGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8bcf34f0b99d74520441b0c23dcc0bff6683db15abff20ce8c07b126a254e00a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5138
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50