Protein

View in Explore
Genbank accession
QZI86693.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSKIRNKAEFDPSTSLNNSNLFINGDMSVWQRGTTFTGLTGSVYTADRWLLTSSGDTASVAKGDPFAIAPVESSYMLINPSVHNGNLGIEQRLEDWWNFNEEVVTLSILVHTDAASASFDIYHGMSGNFEWLGADQTVTSGQGWKRLEWTFTTKNVTSSPDFYSFSIRRTDTGIEPYRFTEVKLEYGTFATPFVAEDPATNLEKCHRYYRNVKTGGNTMYAAVYSDSDITTANKTLSIPYFGMREPVTVKNLAWHAGNSPNSNNASGGVWRFFWTDSGNSARGIVTLTFDSEFNP
Physico‐chemical
properties
protein length:295 AA
molecular weight: 32838,87400 Da
isoelectric point:5,15441
aromaticity:0,13220
hydropathy:-0,40475

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 70E38.1
[NCBI] 		2859293 No lineage information
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86693.1 [NCBI]
Genbank nucleotide accession
MW865341.1 [NCBI]
CDS location
range 5276 -> 6163
strand +
CDS
ATGTCAAAAATAAGAAACAAAGCTGAGTTCGACCCGTCTACCTCATTGAATAACTCTAACCTATTTATCAATGGTGACATGAGTGTTTGGCAACGTGGGACAACCTTCACAGGCCTAACAGGGTCTGTGTACACAGCAGATAGGTGGTTGTTAACCTCATCAGGTGATACAGCAAGTGTAGCTAAAGGAGACCCGTTCGCTATAGCTCCTGTTGAAAGCAGTTATATGTTGATTAACCCAAGTGTTCACAATGGTAACTTAGGTATCGAGCAACGTTTAGAAGACTGGTGGAACTTTAACGAGGAGGTCGTAACCCTTTCTATTTTAGTACACACAGACGCAGCTTCCGCATCCTTTGACATTTATCACGGAATGTCTGGGAATTTTGAGTGGCTGGGTGCAGACCAAACTGTAACCAGTGGACAAGGGTGGAAAAGGTTGGAATGGACATTTACCACTAAGAACGTAACATCTAGCCCTGATTTCTACAGTTTTAGTATTAGAAGAACTGACACAGGAATTGAACCATACCGCTTTACGGAAGTTAAGCTGGAGTACGGTACATTTGCTACACCATTCGTCGCCGAGGATCCTGCAACTAACCTTGAAAAGTGTCACCGCTATTACAGAAATGTAAAGACAGGGGGTAACACAATGTACGCAGCTGTTTATTCGGATAGTGATATCACAACAGCTAACAAAACACTCTCAATTCCATACTTTGGAATGCGTGAGCCTGTGACAGTGAAGAACCTTGCGTGGCATGCGGGGAATTCTCCCAATTCTAACAACGCATCTGGTGGTGTATGGAGATTCTTCTGGACTGACTCAGGGAACAGTGCTCGTGGTATTGTAACACTTACTTTCGATTCAGAGTTTAACCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
486181a17b6c57a51b59914b59f59204a2287f72c1815e0fd03220676f1debf7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8273
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank