Protein

View in Explore
Genbank accession
QDK00655.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MDVTGLDIKYFSIRADNGMYTPEGRVAIQGSDIRIKNSFAPARDGAAERIAKIGVMEFYYNGSKIRQRGFLAQQMADIDDTYTYFGGTALGDDGNEFEIMNVNDRAVMADVVTVVQELQRKNTEIETLKSEVAELKELVNLMLQK
Physico‐chemical
properties
protein length:145 AA
molecular weight: 16241,21640 Da
isoelectric point:4,72152
aromaticity:0,08276
hydropathy:-0,32207

Domains

Domains [InterPro]
DC_1877
STR
3–145
DC_1877
IPR030392
CHP
31–132
IPR030392
IPR030392
CHP
31–78
IPR030392 Coil
QDK00655.1
1 145
Architecture
STR
STR 3-145
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-26175V
[NCBI] 		2576482 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDK00655.1 [NCBI]
Genbank nucleotide accession
MK907271.1 [NCBI]
CDS location
range 70609 -> 71046
strand -
CDS
ATGGACGTAACAGGTCTTGATATTAAATATTTTTCGATCCGAGCAGATAACGGGATGTACACCCCTGAAGGGCGCGTCGCCATCCAAGGATCTGATATCCGCATTAAGAATAGCTTTGCTCCTGCAAGGGATGGCGCAGCGGAAAGGATTGCTAAAATAGGTGTCATGGAATTTTACTATAACGGAAGTAAAATCCGTCAGCGCGGTTTTCTTGCACAGCAAATGGCTGATATCGACGATACCTATACTTACTTTGGTGGGACCGCTCTTGGTGATGACGGTAATGAATTTGAGATAATGAACGTAAATGACCGCGCGGTCATGGCGGATGTAGTAACCGTCGTTCAGGAGTTACAGAGAAAGAATACGGAAATCGAAACGCTGAAGTCAGAAGTCGCAGAGCTTAAAGAACTAGTTAATCTGATGTTACAAAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c9c637b8963c2dd715ed226c6cf04a62e9de27c962b4bdccee1092c83d97cd1d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7906
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural Occurrence of Escherichia coli-Infecting Bacteriophages in Clinical Samples Pacifico,C., Hilbert,M., Sofka,D., Dinhopl,N., Pap,I.-J., Aspoeck,C., Carrico,J.A. and Hilbert,F. 2019 — GenBank