Protein

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Genbank accession
YP_009285799.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANNEFMALFGPDSFTANVFSEANAVKYRLVVRGANLSSTLNAIEVSINGADIINRNTQRDRGINLAIIDGTTLALLDYKTFDMYGDPTTNGNALRDYLGSLPANRIVCFYSYDAIGSNANFTAIMRKIGSVAWPEERFFSNDDRRRSSYSAIYSSTMKKICMENFVGGSGSISQDDTRSFVEVVFDEFSDIGVTGIPERMVDDVQTYQNSGSLYGYHGYGSWNIGTDVFRGDIFKVTGDLYCSQELRDAGGDTYLYIWTETAGAQWVASSLLRTTNLTPDTWHSLSIYFTIPQGTENVKMGCQVYHYPSTVNVGLSQCRNVQISKVPREEVNRNGAAIGVNGVRMQTLSEVDTTGTENPIEQLLSLPVSPAGTPSNKTIVSHNFAELDYLVADPTEYTSTDTTQYLVKEWANKQYDLSKVSLSSVGAKTGDVIRVAGQLKRDATAIANNKRAFIIMQFLDANNQYIGAPQPVIIQDVSTVPNVYTFYKSEGVVPDGAVNFDFGFYRYPSNTNTGSVSVKDVKLSIVR
Physico‐chemical
properties
protein length:528 AA
molecular weight: 58177,27980 Da
isoelectric point:4,98753
aromaticity:0,10606
hydropathy:-0,23826

Domains

Domains [InterPro]
DC_0004
STR
1–528
DC_0004
PS52031
LEC
24–201
PS52031
IPR039477
STR
62–132
IPR039477
YP_009285799.1
1 528
Architecture
STR
STR 1-528
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009285799.1
1 528
Domain Start End Length (AA) Confidence
N-terminal 1 75 75 0,3002
Central domain 76 417 343 0,6303
C-terminal 418 528 110 0,8297
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-75
Central
76-417
C-terminal
418-528

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage vB_CfrM_CfP1
[NCBI] 		1871313 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus miller
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009285799.1 [NCBI]
Genbank nucleotide accession
NC_031057 [NCBI]
CDS location
range 169533 -> 171119
strand +
CDS
ATGGCGAATAACGAATTCATGGCGTTATTCGGCCCTGATAGCTTTACGGCGAATGTGTTTTCAGAAGCAAACGCCGTAAAATATCGATTGGTTGTGCGTGGGGCTAATTTAAGCTCCACACTCAACGCAATTGAGGTTTCTATCAATGGGGCTGATATTATAAACAGAAACACACAACGAGATCGCGGAATTAACCTGGCGATTATTGATGGAACAACGTTAGCATTACTGGATTATAAGACATTTGATATGTATGGTGATCCTACTACGAACGGGAACGCGCTTAGGGACTATTTGGGTTCTCTTCCAGCGAATCGCATTGTGTGTTTTTATAGTTACGACGCAATAGGAAGTAACGCCAACTTTACCGCAATTATGCGTAAAATTGGTTCTGTTGCATGGCCGGAAGAACGTTTTTTCTCAAACGATGATCGTCGTCGTTCGTCGTATTCTGCCATATATTCATCAACCATGAAGAAAATCTGTATGGAAAACTTCGTGGGTGGATCTGGCAGTATATCACAGGATGATACGAGAAGTTTTGTTGAAGTTGTGTTTGACGAATTCAGCGACATCGGCGTTACTGGTATTCCTGAACGTATGGTCGATGATGTACAAACGTATCAGAACAGCGGTTCATTATATGGATATCATGGGTATGGTTCATGGAATATAGGAACCGATGTTTTTCGTGGGGATATATTCAAAGTAACAGGCGATCTGTATTGTTCACAGGAACTTCGTGACGCTGGCGGGGATACGTATCTGTATATCTGGACAGAAACTGCTGGTGCGCAATGGGTAGCGTCTTCTCTGTTGCGTACAACAAACTTAACTCCTGATACGTGGCATTCTTTGTCTATATATTTCACGATCCCGCAAGGCACAGAAAATGTCAAGATGGGTTGTCAAGTATATCATTATCCGTCAACCGTAAACGTAGGTCTTTCTCAATGTCGAAATGTACAAATCAGTAAAGTACCGCGTGAAGAAGTAAACAGAAACGGTGCTGCAATTGGTGTGAACGGTGTACGTATGCAGACGCTTTCCGAAGTTGACACAACCGGAACTGAAAACCCGATTGAACAGTTACTTTCATTGCCTGTATCACCTGCTGGAACTCCGAGCAATAAAACGATTGTTTCGCATAACTTCGCAGAACTTGATTATCTTGTTGCAGATCCAACGGAATATACATCAACCGATACAACCCAATATCTTGTTAAAGAATGGGCTAATAAACAATACGATTTATCGAAAGTGTCATTGAGTAGTGTTGGGGCTAAAACTGGTGATGTTATCCGTGTTGCTGGACAGCTTAAACGTGACGCAACCGCGATCGCGAACAATAAACGAGCATTCATAATCATGCAGTTCCTTGATGCGAATAATCAGTATATTGGCGCACCACAACCAGTTATTATCCAGGATGTAAGCACAGTACCAAACGTGTATACATTCTACAAAAGCGAAGGTGTCGTTCCTGATGGTGCTGTAAACTTTGATTTCGGTTTTTATCGTTATCCCAGCAACACAAACACAGGTTCGGTTTCAGTTAAAGACGTTAAATTGTCTATCGTTCGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7d15f501a16acd5435e1fc3309c00c602b598a1b44819836a401f5a201a0e170
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6434
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative genomics of Morganella phages MP1 and MP2 define new clades among the T4 and T7-like viruses Pinto,G., Oliveira,A., Briers,Y., Oliveira,C., Domingues,L. and Azeredo,J. 2017-04-07 — GenBank