Protein

View in Explore
Genbank accession
UJJ22248.1 [GenBank]
Protein name
long tail fiber distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MATLKPIQFKRSKTAGSRPLPEQVLEGELALNLEDRMIFTKDDEGNIIDLGFAKGGRVDGDIVQVGNYTQTGDYTTSGDINAKTITASAGVVSNGDLKASTGVIRTRGSNSGNAHLWFEGEEVGLTNNYERGVMYALPQTATEGTINLRVMNGFDNSKAQSLFSFRGNGDFSAPRDLVSQRGRFSIEAVAPTINTTRIYTRDKPWRSNSDESYGWLDLVNYVPGENGALALNYVYKGRAMSGGTIWHQLVDERTGPEWALYTGRGPENKAFAVGSSAGKGLGNFTGSLHVGNLGYSAIGNNSITIGETNTGLRQTSAGNLDFLSANNMAFRFSAGEAINRSYNRLHVQHSDSNGNAVNPPANNAQLQVNTSGDENNAGGNGLTLIGYYAGATGEYNHYFRGKGSASFDMQRGININQGGLNVYNGLTNVGQINLTGSMNTTNVPQGTYKWDDLNTVAADAKSYLRRFRSRNNSTIWHETVEGGTWRLSTGSTDAQEELQISTSGVFKVRGEVIALGNGGASGTGNHFRAVYGNYGFFIRNDGGNTYFMLTNSGDQYGTWNSLRPFAINNDTGKVSMANGVAISGGLKVDPGIESEYVKTYSGRIGHGSWASQNDNEAMIFQRITSASTSEYCPILKQKYIGGNRTWSIGTLISVGSFHIHMKDSAGNDRNFAFQPNGDFNGANTINASAISVGSARLSSIATPGGGQFANDGNVYINKSGFAGWIDALFVKKNGDTMSGTLNLNVNGAGINMNTPAGGSTYVIGRRNGVNGFYVGMGSAGNDATFHSYLYNTTLTLRTADIYFNKKVYGAGDADFNNVYIRSDIRLKRNFKKIENALDKVDKLDGLIYEKKNTRESTEYETTEAGIIAQTLRSVLPEAVSEHEGTLNVSASGTIALLVNAIKELKARVEELESK
Physico‐chemical
properties
protein length:914 AA
molecular weight: 98352,47380 Da
isoelectric point:6,92375
aromaticity:0,09300
hydropathy:-0,44147

Domains

Domains [InterPro]
DC_0538
STR
1–725
DC_0538 G3DSA:6.20.80.10 IPR030392 Coil
IPR048390
ATT
499–567
IPR048390 IPR048388 IPR030392
DC_0203
RBD
793–914
DC_0203
UJJ22248.1
1 914
Architecture
STR
ATT
STR
STR
ATT
RBD
STR 1-498 | ATT 499-567 | STR 568-725 | STR 746-758 | ATT 759-817 | RBD 818-914
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJJ22248.1
1 914
Domain Start End Length (AA) Confidence
N-terminal 1 74 74 0,7891
Central domain 75 273 200 0,3850
C-terminal 274 914 640 0,8420
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-74
Central
75-273
C-terminal
274-914

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage Virsaitis27
[NCBI] 		2910775 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia rhapontici
[NCBI] 		55212 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJJ22248.1 [NCBI]
Genbank nucleotide accession
OL770309 [NCBI]
CDS location
range 158048 -> 160792
strand +
CDS
ATGGCAACTTTAAAACCAATACAATTTAAAAGAAGTAAAACAGCTGGTTCAAGACCTTTGCCTGAACAAGTATTAGAAGGTGAATTAGCCCTGAACCTCGAAGATCGTATGATTTTCACTAAAGATGATGAAGGGAATATCATTGACCTTGGTTTTGCAAAAGGTGGTCGTGTAGACGGCGATATTGTTCAGGTTGGTAATTACACCCAAACTGGGGATTACACTACTTCTGGGGACATCAATGCTAAAACTATAACCGCTTCAGCTGGTGTAGTTTCTAATGGCGATTTAAAAGCTTCTACTGGGGTTATTAGAACTAGAGGTAGTAATAGTGGGAACGCTCATCTTTGGTTTGAAGGTGAAGAAGTAGGCCTAACTAATAATTATGAAAGAGGCGTCATGTACGCTTTACCACAAACCGCTACTGAAGGGACTATTAACCTTAGGGTTATGAATGGTTTTGATAATAGCAAAGCCCAATCTTTATTTAGCTTCCGTGGTAACGGTGATTTTTCAGCTCCAAGAGATTTAGTATCTCAACGTGGGCGTTTTTCTATCGAAGCTGTGGCCCCTACAATTAACACAACTCGTATTTACACAAGAGATAAACCTTGGCGGTCAAATAGCGATGAATCTTATGGGTGGTTAGATTTAGTTAATTATGTTCCTGGAGAAAACGGGGCACTAGCATTAAACTATGTCTATAAAGGTCGAGCCATGTCTGGCGGAACCATTTGGCATCAATTGGTTGATGAAAGAACCGGTCCTGAATGGGCTCTTTATACTGGTAGAGGTCCTGAAAATAAAGCTTTTGCAGTAGGGTCATCCGCAGGTAAAGGTCTCGGTAACTTCACAGGCAGTTTACATGTAGGTAATCTAGGATATTCTGCTATTGGCAATAACTCTATTACTATTGGCGAAACTAATACTGGTTTAAGACAAACTTCAGCAGGTAATTTAGATTTCTTATCGGCTAATAATATGGCTTTCAGATTTTCTGCAGGTGAAGCCATAAACCGTTCTTATAATCGATTACACGTCCAGCATTCTGATTCTAATGGTAATGCTGTTAATCCACCAGCTAATAATGCTCAACTACAAGTAAATACTTCAGGTGATGAAAATAACGCAGGCGGAAACGGATTAACCTTAATAGGTTATTATGCTGGAGCTACAGGCGAATACAATCATTATTTCCGTGGTAAAGGTTCTGCATCTTTTGATATGCAACGTGGTATAAACATTAACCAAGGTGGCCTTAATGTTTATAATGGTTTAACGAATGTAGGCCAAATTAATTTAACAGGTTCAATGAATACTACTAACGTTCCACAAGGAACTTATAAATGGGACGATTTGAACACTGTAGCTGCTGATGCTAAATCTTATTTACGTAGATTCCGTTCAAGAAATAACTCAACGATTTGGCATGAAACAGTCGAAGGTGGAACTTGGCGTTTATCTACTGGCTCCACTGACGCTCAAGAAGAATTACAAATTAGTACTAGTGGTGTGTTTAAGGTCAGAGGGGAAGTAATTGCTCTTGGAAATGGTGGAGCCTCTGGGACTGGAAACCATTTCCGTGCCGTGTATGGAAATTACGGATTCTTTATTCGTAATGATGGTGGCAACACTTATTTTATGTTGACTAATTCTGGTGATCAATATGGTACATGGAATAGTTTACGTCCTTTTGCTATTAATAATGATACTGGTAAAGTGTCGATGGCTAACGGCGTCGCTATTAGTGGGGGCCTAAAGGTTGATCCTGGTATTGAATCCGAATATGTTAAAACTTATTCAGGTCGTATTGGGCATGGTTCTTGGGCTTCACAGAATGATAATGAAGCAATGATTTTCCAAAGAATTACTAGTGCTTCTACTTCTGAATATTGTCCTATTCTTAAGCAAAAATATATTGGCGGAAATAGAACTTGGTCAATAGGTACTTTGATTAGCGTAGGTTCTTTCCACATCCATATGAAAGATTCTGCTGGTAATGACAGAAACTTTGCTTTTCAACCTAACGGTGATTTTAATGGTGCTAATACCATTAATGCATCAGCTATATCTGTAGGCAGTGCTAGACTTAGTTCTATCGCTACTCCGGGCGGTGGTCAATTTGCTAATGACGGTAACGTTTATATCAATAAATCTGGTTTTGCAGGCTGGATAGATGCACTATTTGTTAAGAAAAATGGCGATACCATGTCTGGTACTTTAAACCTCAACGTTAACGGCGCGGGCATAAATATGAACACCCCTGCGGGTGGTTCTACTTATGTTATAGGTAGGAGAAACGGGGTCAACGGATTTTATGTTGGTATGGGTAGTGCTGGTAATGATGCAACGTTCCATAGTTATTTGTACAACACTACTCTTACCTTACGTACAGCAGATATCTATTTTAACAAAAAAGTTTATGGTGCAGGTGATGCCGACTTTAACAACGTTTATATTCGTTCAGATATTCGTTTAAAACGCAACTTCAAGAAAATTGAAAATGCTTTAGATAAAGTTGATAAACTTGATGGTTTAATTTACGAGAAGAAAAATACTCGTGAATCTACTGAATATGAAACAACTGAAGCAGGTATCATTGCCCAGACTTTACGATCTGTATTACCTGAAGCCGTTTCAGAGCATGAAGGTACTCTTAATGTTTCAGCTTCTGGGACTATTGCTCTGTTAGTTAATGCTATCAAAGAACTTAAAGCTCGTGTTGAAGAACTTGAATCAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
495dcde910727441ffc0f968a245d9d7f672d516ee40e3a7a26e46e47c3aae5e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3085
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage Virsaitis27 Dislers,A., Zrelovs,N. and Kazaks,A. 2020-06-19 — GenBank