Protein

View in Explore
Genbank accession
YP_009147975.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MAVQGPWVGSSYVAETGQNWASLAANELRVTERPFWISSFIGRSKEEIWEWTGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYADIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGGFRVGHTEAGGGGGRPLGAGGVSSLNLNGDNATLGAPGRGYQLGTGYAGTGGDVGNPGSASSEGAGGGAAGRAVVGTSPQWINTGNIAGSWL
Physico‐chemical
properties
protein length:249 AA
molecular weight: 25502,72700 Da
isoelectric point:6,07071
aromaticity:0,09639
hydropathy:-0,27309

Domains

Domains [InterPro]
IPR048291
ATT
1–41
IPR048291 IPR007932
DC_1679
STR
4–183
DC_1679
YP_009147975.1
1 249
Architecture
ATT
STR
RBD
ATT 1-41 | STR 42-183 | RBD 184-249
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STML-198
[NCBI] 		1204531 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Gelderlandvirus
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009147975.1 [NCBI]
Genbank nucleotide accession
NC_027344.1 [NCBI]
CDS location
range 31936 -> 32685
strand +
CDS
ATGGCAGTTCAAGGACCTTGGGTAGGTTCGTCTTATGTCGCTGAAACAGGTCAAAACTGGGCCTCATTAGCGGCGAATGAATTAAGAGTAACGGAGAGGCCCTTTTGGATTTCCTCATTTATAGGGCGCTCTAAAGAAGAAATTTGGGAATGGACTGGAGAAAATCACAGTTTCAACAAAGATTGGTTAATAGGCGAACTTCGCAATAGAGGTGGTACTCCTGTAGTAATTAATATAAGAGCTCATCAAGTGTCTTATACTCCAGGCGCACCTTTATTTGAATTTCCCGGAGACCTTCCAAATGCATATATTACACTTAACATTTATGCAGATATATATGGAAGAGGTGGTACTGGTGGAGTTGCTTATTTAGGCGGAAACCCCGGCGGAGACTGTATTCATAATTGGATTGGAAACAGACTTAGAATAAACAACCAAGGCTGGATTTGTGGTGGCGGAGGCGGCGGGGGTGGCTTTCGTGTTGGACATACTGAAGCTGGTGGTGGTGGCGGACGACCTTTGGGAGCGGGCGGAGTTTCAAGCTTAAATCTAAACGGAGACAATGCTACTTTGGGTGCTCCCGGGCGAGGATATCAACTCGGAACCGGATATGCAGGTACTGGCGGGGATGTTGGTAACCCAGGTTCAGCCAGTTCAGAAGGAGCAGGCGGAGGCGCAGCAGGACGAGCTGTTGTAGGAACTTCTCCTCAATGGATAAACACTGGTAATATTGCTGGCTCTTGGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
edbb5daafc29dd786e7733609d4d03a9a630817b2fa5abe438739ab3ae71f755
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8596
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages quickly and effectively reduce contamination of various foods with Salmonella Woolston,J., Parks,A.R., Hanna,L.F., Charbonneau,D. and Sulakvelidze,A. 2016-07-02 — GenBank