Protein

View in Explore
Genbank accession
XCO40314.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTKPNFPLGLESQDQSVFQEGILNNGVVEHGPDAVMTVPETPDASGVPSAVRYNEDDDQFEGYYNEGGWLPLGGGNGGRWELLPHASSSLLQIGRAYLVDNIDGASTVIFPSPKRVGDSITVCDLFGKFSTYPLTVDGNGKSIYGSADSMTISTDNVSATFTWTGEARGWVITSGVGLGQGRVYSREIYSQILSATTPSITLSTQPSIVDVYVDGKRLKESLYTLDGYEVKFDPALASGSDVQIIQYIPIQLGAGGGGSGGTVITWEYNGGSAIGGETQIVLDVVVDSVSEIYIRGSRQQIGRGFTFDPATSTITLADELDAGDDVVVVINGDPTVYNQIDRSPQEVARANNVKNSEVILSTETNTVLDGKNIVYDVVAQTSWRIPTGIPAGAKINRVIGNILVYTPGNVSVNLIEIPSAYSLKSQLGSDYGSFLLNAKRKPLGEAVLAVSTAGLLYSSSWVSIMEYAHLVTNRPDPNDQTTWVWDPAIQAYLDDTGILINQTPVNSNMKAKFPLVFPPGVFKIENSYLLERIAGSTGSLATIFMFIGSGVTSTIIQPMTEGQIAFTVQDCKINFRDIGFRSGADYQTCLVLGNKTLWKPVFHCNMTRVGASGFGKGLVIYLAFDSTFEDIFVQNISKMDVTGTQVSYGITIEKYEGPANGGTAGDGTGDDSNQLVFIRPTVETAKADNSILFNVAGRSTSLPHHAINLFGGHFETHNLKAKLLNLAFGYNVNMFGTVFSQNGPTIDSDNNPITTVYRGVYIENSQNVNMFGCRIGTTNRLASVGVSDTKFIKITGTSQNVNLINTHLIGPYNDISSERHNIDNIIDYSEATKGIKSFTVQGVTAGDYTSRPITKDIRISSIDGKKEYSFYTDNSGVLHLSYSTNIADSSTPTDLMTMDTSGNILTSADLTLGGLAGTAATRRLSGNGGYIAFDTIGRVYFNAVSNSQQWVMGSAAFNPTTDNAFTLGQSGFRISASFVVKRQYTATVYDSAGNGSPEGVVTAGVGSTYRRLDGTAGTCFYVKESGTGNTGWVAK
Physico‐chemical
properties
protein length:1039 AA
molecular weight: 111238,94530 Da
isoelectric point:4,91239
aromaticity:0,09240
hydropathy:-0,11578

Domains

Domains [InterPro]
DC_1946
ATT
1–812
DC_1946 DC_2009
G3DSA:3.30.2020.50
ATT
339–422
G3DSA:3.30.2020.50
XCO40314.1
1 1039
Architecture
ATT
RBD
ATT 1-812 | RBD 999-1039
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO40314.1
1 1039
Domain Start End Length (AA) Confidence
N-terminal 1 486 486 0,9958
Central domain 487 845 360 0,9856
C-terminal 846 1039 193 0,8812
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-486
Central
487-845
C-terminal
846-1039

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146041
[NCBI] 		3232220 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO40314.1 [NCBI]
Genbank nucleotide accession
PP889490 [NCBI]
CDS location
range 138879 -> 141998
strand +
CDS
ATGGCTAATAAACCCACGAAACCAAATTTTCCGCTTGGGCTTGAATCACAAGATCAATCCGTATTTCAAGAAGGTATTCTGAATAATGGTGTTGTAGAACATGGCCCAGATGCAGTAATGACTGTGCCAGAAACTCCTGACGCATCTGGGGTTCCTTCTGCTGTCCGTTATAACGAAGATGACGACCAGTTTGAAGGCTATTACAACGAAGGCGGTTGGTTGCCGCTTGGGGGCGGTAACGGTGGGCGCTGGGAACTCCTTCCGCATGCCTCCTCTTCCTTGTTACAGATCGGCCGTGCATATCTGGTGGATAACATCGACGGTGCCTCTACGGTGATTTTCCCTTCCCCTAAACGGGTTGGTGATAGCATCACTGTGTGTGACCTTTTTGGTAAATTCTCAACTTATCCTCTGACTGTCGACGGTAACGGTAAATCGATCTATGGCTCTGCGGATAGCATGACGATTTCTACCGATAATGTCAGTGCGACTTTCACATGGACTGGTGAAGCCCGTGGCTGGGTTATTACGTCAGGCGTCGGTCTGGGGCAAGGCCGGGTTTACAGCCGCGAAATTTACAGCCAAATTCTGTCAGCGACGACACCATCTATTACCCTGAGCACTCAACCATCTATTGTAGATGTGTACGTTGACGGAAAACGTTTGAAAGAATCCCTGTATACTCTTGACGGGTATGAAGTCAAATTCGATCCGGCGTTGGCCTCTGGTTCTGATGTGCAGATTATTCAGTACATCCCAATTCAGCTCGGCGCGGGCGGCGGAGGTTCTGGTGGCACTGTAATCACCTGGGAATACAACGGTGGTTCAGCTATCGGCGGCGAAACCCAAATCGTGTTGGACGTGGTCGTGGACTCAGTATCTGAGATCTACATCCGTGGTTCCCGTCAACAGATAGGGCGTGGGTTCACATTTGATCCTGCCACCAGTACGATTACCTTGGCGGATGAACTGGATGCCGGGGATGACGTTGTCGTCGTTATCAACGGTGACCCCACGGTTTACAACCAAATCGATCGTTCCCCACAAGAAGTGGCGCGGGCCAACAACGTCAAAAACTCTGAAGTCATCCTCAGCACTGAGACGAATACAGTTTTAGACGGTAAGAACATTGTTTATGACGTGGTGGCTCAAACAAGTTGGAGAATTCCAACAGGGATACCGGCTGGTGCGAAAATAAACCGTGTTATCGGGAATATTTTAGTGTATACGCCAGGCAACGTTAGCGTAAATCTCATAGAAATTCCTTCAGCTTATTCTCTAAAATCTCAATTAGGTTCTGATTACGGGTCATTTTTGCTCAATGCCAAAAGAAAACCTTTGGGTGAAGCTGTACTTGCAGTATCTACTGCAGGTCTGTTGTACAGTTCCTCCTGGGTTAGTATTATGGAATATGCTCATCTGGTTACTAATCGTCCAGATCCAAACGATCAGACCACTTGGGTTTGGGATCCCGCGATACAAGCATATTTAGACGATACAGGGATTTTGATTAATCAAACACCTGTTAACTCCAATATGAAAGCTAAATTCCCGTTGGTGTTCCCGCCGGGTGTGTTCAAAATCGAAAATAGCTATTTGTTAGAACGGATAGCAGGCAGCACAGGGAGCCTTGCTACTATCTTTATGTTCATCGGTTCAGGGGTGACATCGACTATCATTCAACCGATGACAGAAGGGCAGATAGCATTCACTGTACAAGATTGTAAAATCAATTTCAGAGACATTGGTTTCCGTTCTGGGGCTGATTACCAGACATGTTTGGTCTTGGGAAATAAAACTTTGTGGAAACCAGTTTTCCATTGTAATATGACTCGAGTGGGAGCGTCTGGATTTGGTAAGGGTCTGGTGATTTACCTCGCATTCGATTCTACCTTTGAGGATATATTTGTACAGAATATATCTAAAATGGATGTTACTGGTACTCAAGTTTCCTATGGTATAACCATAGAAAAATATGAGGGTCCTGCTAATGGCGGGACTGCTGGTGACGGAACCGGTGATGATTCTAACCAATTGGTGTTTATTCGTCCTACTGTTGAAACTGCGAAAGCAGACAATTCTATACTTTTCAACGTAGCAGGCCGTTCAACTTCATTACCGCACCATGCTATTAATTTGTTTGGCGGCCATTTCGAAACGCATAACTTAAAAGCTAAGTTGCTGAATCTTGCATTTGGCTATAATGTCAACATGTTCGGCACAGTTTTTTCACAAAACGGGCCTACTATTGATTCTGACAATAACCCGATAACAACGGTTTACCGGGGTGTTTACATCGAGAACTCTCAGAACGTCAATATGTTTGGTTGCCGGATTGGAACTACCAACAGACTGGCTTCTGTTGGCGTTTCTGATACCAAGTTTATCAAAATCACGGGTACTTCACAGAACGTGAATTTGATAAACACCCATTTGATCGGGCCTTATAATGACATATCTTCTGAGCGTCATAATATTGACAACATTATAGATTATTCGGAAGCAACAAAAGGGATAAAATCATTTACGGTACAGGGCGTCACCGCCGGGGATTATACCAGCCGCCCGATAACCAAAGACATAAGAATCAGCAGTATAGACGGGAAGAAAGAATATTCTTTCTATACTGATAATTCCGGGGTTTTGCATTTATCGTATTCGACCAATATAGCGGATTCAAGTACGCCTACAGATTTAATGACGATGGATACAAGTGGTAATATCCTGACGTCAGCGGACTTGACTCTAGGGGGGTTGGCAGGAACTGCAGCTACAAGACGACTGTCAGGTAATGGCGGCTATATCGCCTTTGACACAATTGGTCGTGTGTATTTCAACGCTGTAAGCAACTCCCAACAATGGGTGATGGGTTCGGCAGCATTTAACCCGACGACCGATAACGCATTCACTTTGGGGCAATCAGGGTTTAGGATATCTGCCAGTTTTGTCGTGAAGCGCCAATATACTGCGACAGTATATGATTCCGCTGGTAATGGTAGCCCAGAAGGGGTTGTAACTGCTGGTGTTGGGTCAACTTATCGTCGGTTGGACGGAACGGCAGGTACTTGTTTCTATGTGAAAGAATCTGGAACCGGTAATACCGGTTGGGTGGCGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
89b1bb64c16362c6809cca0d0581755aad782ec0175bd25975be744aa27eb97a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2743
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank