Protein

Genbank accession
YP_009196394.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MSKIPFRVSDGLDGADQRAINIGYPDINNHTDGVNVQYFIDWNTLQHYDEKRKYKKNFAVIFNDRVYYALRDVPVDNSASAGPFNATHWQMIRNDPNWMNVSSTPPGGLLLVPGAFVSADPTYSDLDFMLPRAPQNGDTVVIKDVSSKVSTMKLIVRTTDKVFDNGRSDYQLTYPKATVWFSYDVTMNLGKGGWRINTTNPSIHQKTIGPTAQGTQLSAGDSIFRRSSAGKITMILPRYANDGDTITTTDLDLMTPTNNLTIKTHPGAPDSSIGEVGRKSQIFKTTGWGRLTYSQLRDLWEVWDGDEYERWTKIVPTTPASNITLIPSARILIAGSSGEIIFTLPQAPADGDTVELSMRNASKGVVGTLKAALGDKIHASAAMFDIPRLNDVNSFENTSEVQEIKYVSTGHGEQIKLTYMEDKKSWAIAEQSIAPFRASSVASVRNEPGLVFFANEAEVLKNSEDSPSDESAVTPLTLAKKTATESRRGIAKLATQALTNAGVDDLTIVTPKKLHERTALEDRRGIAEIATQEETNIGTDDSRIVTPKKLAGRAATEGMTGIAALVKVGGAKQGTRTAPGEGVNNFNDHAKIVTPKVLFEKTATETNLGMMFWATQTEVNGGAEGNFVVRPSTLAARTATPTRTGLARMVDMSIGEHTKNVTDSLDSNVFITPKALASRIANYEMDGITRPAKDEDVVAGTDDTKYINPLKLKYFADEVVKIEAPDSDGLRITGTVWKGLTFKVSQSNETTRGTSRIATDDETKAGVLDNVIVTPRKLSLRTATPTRTGVIRLATPAEAAGGTLDNVAITPATMGSVISDSPEWGATEVRRGSVYNGSLGNNSDAGATWQGNDVAGSTRALANYKHESYAVSPRGLNTALQHYLPIAAKAADTSKFDGMNSNQFMRTDQDTSTTGSLIVGKNSNAAWFRASKPVGVVSSGANIGWNKNNGSGRTDFMNGRGAGVGGFNFWNGNDNSDSEIIAEIDGTGKVIATGLNISGKSTISDDATFDKEVRYKTQTLDDRFVNVIGDTMTGNLKFNGTSYIEFADSGVIDGTINYMIHGTCGSNDFGYVAVGATAADAGFLEIGTQDGGNEPIYVRQRSGKTGSPSTIKNSATLLDTGGNTVFPKTTSSDRLVARNTGLDAIAWGNKAGKLSNAGNLFGEIWGNTWLSEYLTKTFDTKVDRAGDTITGSLTVKKDVIVEGSFKIKVGTKYLVIRPNPATETVEFDWE
Physico‐chemical
properties
protein length:1230 AA
molecular weight: 132459,43020 Da
isoelectric point:5,84131
aromaticity:0,07398
hydropathy:-0,37699

Domains

Domains [InterPro]
G3DSA:6.20.70.20
1147–1178
G3DSA:6.20.70.20
YP_009196394.1
1 1230
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage S13
[NCBI] 		1327935 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cronobacter sakazakii
[NCBI] 		28141 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Cronobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009196394.1 [NCBI]
Genbank nucleotide accession
NC_028773 [NCBI]
CDS location
range 9548 -> 13240
strand -
CDS
ATGAGTAAAATCCCATTTCGCGTATCCGACGGTCTAGACGGTGCAGATCAACGCGCTATCAATATCGGATATCCAGATATCAACAATCACACTGACGGTGTGAACGTCCAGTATTTCATCGACTGGAACACTTTACAACATTACGATGAAAAACGCAAGTACAAAAAGAATTTTGCTGTAATTTTTAACGACCGTGTTTACTACGCGTTGCGTGATGTCCCGGTGGACAACTCTGCATCAGCAGGTCCGTTTAATGCAACCCACTGGCAAATGATTCGTAACGACCCGAACTGGATGAACGTTAGTAGCACTCCTCCGGGTGGATTACTGCTTGTTCCTGGTGCGTTCGTATCAGCAGATCCAACTTATTCGGATCTGGATTTCATGCTGCCTCGTGCTCCTCAGAACGGTGATACCGTCGTTATCAAAGATGTTAGCTCAAAAGTTTCTACAATGAAACTTATTGTCAGAACAACCGATAAAGTTTTCGATAATGGACGTTCAGATTATCAGTTAACTTATCCGAAAGCAACTGTTTGGTTCTCATATGACGTAACTATGAATCTTGGTAAGGGTGGCTGGAGAATTAACACTACTAATCCTTCCATTCATCAAAAAACTATAGGACCAACTGCGCAAGGAACTCAACTGTCGGCTGGTGACTCTATCTTCCGTCGTTCTTCGGCTGGTAAGATTACGATGATTTTGCCACGTTATGCAAATGACGGTGACACAATTACAACAACTGACTTAGATTTAATGACTCCTACTAACAATCTGACTATTAAAACGCATCCAGGTGCACCTGATAGCTCAATCGGTGAAGTCGGAAGAAAGTCTCAGATTTTCAAAACCACAGGTTGGGGTCGTCTGACGTACTCACAATTGAGAGATCTGTGGGAAGTATGGGACGGCGATGAATACGAACGTTGGACTAAAATTGTTCCTACAACTCCAGCTTCAAACATTACTCTTATTCCTAGTGCGCGTATTCTGATCGCAGGTTCATCAGGCGAAATCATATTCACTCTACCTCAAGCTCCAGCAGACGGTGATACCGTCGAACTGAGTATGAGAAACGCTTCTAAAGGTGTCGTAGGAACTCTTAAGGCTGCGTTAGGTGACAAGATTCATGCAAGTGCAGCAATGTTCGATATTCCTCGTCTGAACGATGTTAATTCATTCGAAAATACCTCCGAAGTTCAGGAAATCAAATACGTTTCAACCGGTCACGGTGAACAGATTAAACTGACTTACATGGAAGATAAAAAATCATGGGCAATTGCAGAGCAATCAATCGCTCCGTTCCGTGCTTCTTCTGTAGCGAGTGTTCGTAACGAACCAGGTCTCGTTTTCTTTGCAAACGAAGCCGAGGTTCTGAAAAACAGTGAAGATAGTCCAAGTGACGAATCTGCGGTTACTCCTTTAACTCTGGCTAAAAAGACTGCAACTGAGTCAAGACGAGGTATCGCTAAATTAGCAACCCAAGCTCTTACCAACGCAGGCGTGGATGATTTAACGATTGTTACACCTAAGAAACTTCATGAGCGCACCGCGCTGGAGGATCGTCGTGGTATCGCAGAAATTGCAACTCAAGAAGAAACAAACATCGGAACAGATGATTCTAGAATTGTTACTCCTAAAAAGTTAGCAGGACGTGCTGCAACTGAAGGAATGACAGGAATCGCTGCGCTTGTAAAAGTTGGCGGTGCAAAACAAGGAACAAGAACTGCTCCTGGTGAAGGGGTCAATAATTTTAACGATCATGCGAAAATTGTTACTCCTAAAGTTCTGTTTGAAAAAACTGCGACTGAAACAAATCTTGGTATGATGTTCTGGGCGACTCAGACGGAAGTTAATGGCGGAGCAGAAGGTAACTTCGTTGTTCGTCCATCGACACTCGCGGCTCGTACTGCGACTCCTACTCGTACAGGTCTTGCTCGCATGGTTGATATGTCAATCGGTGAACATACGAAAAACGTTACCGATAGTCTTGATTCTAACGTATTCATTACACCAAAGGCTCTTGCAAGTCGTATCGCAAACTATGAAATGGATGGTATCACACGTCCTGCAAAAGATGAAGACGTTGTGGCAGGAACAGACGATACGAAATATATCAATCCGTTGAAGTTGAAATATTTTGCTGACGAAGTTGTCAAGATCGAAGCTCCTGATTCCGACGGACTAAGAATCACAGGAACTGTATGGAAAGGTTTAACGTTCAAAGTATCACAATCAAACGAAACAACTCGCGGAACTTCACGCATCGCAACCGATGATGAAACAAAAGCTGGTGTTCTTGATAACGTGATTGTTACTCCTCGTAAACTGTCATTAAGAACCGCAACCCCTACAAGAACAGGTGTTATCAGACTTGCAACTCCTGCGGAAGCTGCCGGTGGTACTCTCGATAACGTCGCTATTACTCCTGCAACCATGGGATCAGTAATCTCTGATTCTCCAGAATGGGGCGCAACCGAAGTTCGTCGTGGTTCAGTTTACAACGGTTCACTGGGAAATAACTCAGATGCAGGTGCAACATGGCAAGGAAACGATGTCGCTGGATCAACTCGTGCTCTTGCTAACTACAAACACGAAAGTTATGCAGTTTCTCCTCGAGGACTGAATACAGCATTACAGCATTATTTACCAATTGCTGCTAAAGCTGCTGATACTTCGAAATTCGATGGAATGAATAGTAATCAGTTCATGAGAACCGATCAAGATACCAGCACAACGGGATCTTTGATTGTTGGAAAAAACTCAAATGCTGCATGGTTCAGAGCAAGCAAGCCAGTGGGTGTGGTTTCATCCGGTGCAAACATAGGATGGAATAAAAACAACGGTTCAGGAAGAACTGATTTTATGAATGGTCGTGGAGCTGGTGTTGGCGGATTTAACTTCTGGAACGGAAACGATAATTCCGATTCTGAAATTATCGCCGAGATTGATGGAACTGGTAAAGTAATTGCAACAGGACTTAATATTTCCGGAAAATCTACTATTTCAGACGATGCAACGTTTGATAAAGAAGTTCGATATAAAACACAAACTCTCGATGATCGTTTTGTTAACGTTATCGGCGATACAATGACCGGAAATCTGAAATTCAATGGAACGTCATATATTGAATTTGCAGATAGCGGTGTTATCGACGGAACGATTAATTATATGATTCACGGAACATGTGGTTCTAACGACTTTGGATACGTTGCAGTAGGTGCAACTGCTGCGGATGCAGGATTCTTAGAAATAGGAACTCAAGATGGTGGAAATGAACCTATTTACGTTCGTCAACGTTCTGGTAAAACAGGATCACCTAGCACCATTAAAAACTCCGCGACTCTGCTTGATACCGGTGGTAACACTGTGTTTCCTAAAACAACGTCATCGGATCGTCTTGTCGCTCGCAACACCGGACTTGACGCTATCGCTTGGGGTAATAAAGCTGGCAAATTAAGTAACGCCGGTAACTTGTTCGGTGAAATATGGGGAAATACCTGGTTAAGCGAATATCTAACCAAAACATTTGATACCAAAGTTGATCGTGCAGGTGACACAATCACCGGTTCTTTGACAGTGAAAAAAGATGTTATCGTTGAGGGAAGTTTCAAGATTAAAGTTGGTACGAAATATCTGGTAATTCGTCCTAACCCAGCAACAGAAACAGTTGAATTTGATTGGGAGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1690df12bd30c9b3ffec04b81abc535ced7aee2e93b7aae558cdb0c7a0a800c1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2387
Evidence 0,2387
Download PDB

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Cronobacter sakazakii Bacteriophage S13 Kim,Y., Shin,H. and Ryu,S. 2012-06 — GenBank