Protein

View in Explore
Genbank accession
QHR76420.1 [GenBank]
Protein name
putative tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MAAGTLSVTNNSKAVEGVDTTFTAFKAGDFLTLVVGQVPYTVAIASIESATALTLVLPFDGPTATGLAWDGVKRDTMSLATMGVTVQAQKALRLMIADENNWRAIFGDAEEITVSLPNGQVMQGMSWGYLSQLMKQIDPSKFLAKSNNLSDVDDPAAARGHLGIGPTDNVTVNRLVTNARIQAGRATWDGNSWGTAEVRASLLMLMPDGVSPPGMYVMPLGTEGGYPTQFVYNFDASDWRTPSQVTAQNFTATKTNMGYSQLWSGALFRGPAWLADNGVENYQSLVGGAVGTSGYGFSSGVAFGMMTTGGASWPTAQISVGTMDRDAAGNIDRQTQFRFSFRGTISYSAGSEGSGSFQQVPASDRNLKHDIADDTSSTAYDNIKAMRFRTFVFNNDEQERQRRGVIAQELEEIDPLYVKHRIYHNEELNGPLVHQLELDTAPLLLDTMRALQDTIKQVEDLKAEIAALKQAEDLKK
Physico‐chemical
properties
protein length:476 AA
molecular weight: 51492,17640 Da
isoelectric point:4,89159
aromaticity:0,08403
hydropathy:-0,23151

Domains

Domains [InterPro]
DC_0162
STR
1–476
DC_0162
IPR030392
CHP
363–465
IPR030392
IPR030392
CHP
363–416
IPR030392 Coil
QHR76420.1
1 476
Architecture
STR
STR 1-476
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage jat
[NCBI] 		2696411 Uroviricota > Caudoviricetes > Dhillonvirus >
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR76420.1 [NCBI]
Genbank nucleotide accession
MN850650 [NCBI]
CDS location
range 25988 -> 27418
strand -
CDS
ATGGCAGCGGGCACACTATCCGTAACGAATAACAGCAAGGCGGTTGAAGGGGTTGACACGACGTTTACCGCGTTTAAAGCTGGCGACTTCTTAACGCTGGTGGTAGGGCAAGTCCCCTACACCGTGGCAATCGCGTCCATTGAAAGCGCAACCGCGCTCACGCTGGTGTTGCCGTTCGACGGCCCGACGGCAACCGGCCTTGCGTGGGATGGCGTTAAGCGCGATACCATGTCACTGGCAACGATGGGCGTTACCGTACAGGCCCAAAAAGCATTGCGCTTGATGATCGCAGATGAAAACAACTGGCGTGCAATCTTCGGCGACGCTGAAGAAATAACAGTGTCGTTACCTAACGGGCAGGTTATGCAGGGCATGTCATGGGGCTATCTGTCGCAGCTAATGAAGCAGATCGACCCGTCGAAATTTCTGGCTAAGTCCAACAACCTTAGCGACGTTGATGACCCCGCGGCAGCGCGCGGTCACTTAGGCATCGGGCCGACGGATAACGTTACCGTCAACCGACTAGTCACCAACGCGCGTATCCAAGCAGGACGGGCTACGTGGGACGGGAATAGCTGGGGGACCGCAGAAGTAAGGGCGTCGCTGTTAATGCTCATGCCCGACGGCGTGTCGCCTCCGGGGATGTATGTTATGCCGCTCGGCACTGAGGGTGGATACCCAACACAATTTGTGTATAACTTCGACGCGTCAGATTGGCGAACCCCGTCGCAGGTCACCGCCCAAAATTTCACGGCTACGAAAACAAACATGGGCTATAGCCAATTGTGGTCAGGCGCGCTATTCCGTGGCCCTGCCTGGCTTGCGGACAACGGCGTGGAAAACTACCAATCTCTGGTAGGCGGCGCGGTTGGCACTTCCGGGTACGGCTTTTCCAGTGGCGTTGCGTTTGGCATGATGACGACTGGCGGGGCCAGTTGGCCTACTGCGCAGATTTCCGTCGGCACAATGGACCGCGACGCGGCTGGTAACATAGACCGACAGACCCAGTTCAGATTCAGCTTTCGAGGCACTATCTCCTACTCGGCGGGGTCAGAGGGGTCGGGGTCATTCCAGCAAGTGCCAGCGTCGGACCGCAACCTTAAGCACGATATTGCCGATGACACCAGCAGCACAGCATACGACAACATTAAGGCTATGCGATTCCGCACATTCGTATTCAACAACGACGAACAGGAACGGCAGCGCCGCGGTGTTATCGCGCAAGAACTGGAAGAAATCGACCCCCTGTATGTAAAGCACCGCATATACCACAACGAAGAACTGAACGGGCCGCTGGTGCACCAGCTTGAACTGGATACGGCGCCGCTGTTACTCGACACTATGCGAGCGTTGCAGGATACGATTAAGCAGGTGGAGGATTTGAAGGCGGAGATCGCGGCGTTGAAGCAGGCGGAAGATTTGAAGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
869f3a11b411ac2c7108119b97a7030b48596265042de0fbd5d6b1dcc45493a7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7165
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank