Protein

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Genbank accession
AAP75893.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,70
Protein sequence
DPIAFTYERYGWKDKFFLVDEVENTRDGKINLVLQEYGEDVFINSEQVDNSGNDIPDISNNVLPPRDFKYTPTPGGVVGAIGKNGELSWLPSLTNNVVYYSIAHSGHVNPYIVQQLENNPNERMIQEIIGEPAGLAIFELRAVDINGRRSSPVTLSVDLNSAKNLSVVSNFRVVNTASGDVTEFVGPDVKLAWDKIPEEEIIPEIYYTLEIFDSQDRMLRSVRIEDVYTYDYLLTYNKADFALLNSGALGINRKLRFRIRAEGENGEQSVGWATI
Physico‐chemical
properties
protein length:275 AA
molecular weight: 30946,20720 Da
isoelectric point:4,56556
aromaticity:0,10182
hydropathy:-0,31891

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAP75893.1
1 275
Domain Start End Length (AA) Confidence
N-terminal 1 171 171 0,9761
Central domain 172 264 94 0,3872
C-terminal 265 275 10 0,0860
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-171
Central
172-264
C-terminal
265-275

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage T5
[NCBI] 		2695836 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus T5
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAP75893.1 [NCBI]
Genbank nucleotide accession
AY303687.1 [NCBI]
CDS location
range 1 -> 828
strand +
CDS
GATCCTATTGCTTTCACATATGAACGTTACGGCTGGAAGGACAAATTCTTCCTGGTTGACGAAGTAGAAAATACTCGTGATGGTAAAATTAATCTAGTCCTCCAAGAGTATGGAGAAGATGTATTTATTAATTCCGAACAGGTAGATAATAGTGGTAATGATATTCCTGATATTAGTAATAACGTTCTACCGCCTAGAGACTTTAAGTACACCCCTACTCCAGGTGGCGTAGTTGGTGCTATAGGTAAGAATGGTGAGCTATCCTGGCTTCCTAGTCTTACAAATAACGTAGTATACTATTCTATTGCACATTCTGGACATGTTAATCCCTACATAGTTCAACAACTGGAAAATAATCCTAATGAGAGAATGATTCAGGAGATTATAGGGGAGCCTGCTGGTTTAGCTATTTTTGAGCTACGCGCAGTAGATATTAATGGTAGACGTAGTTCTCCAGTTACACTATCTGTAGATCTTAACTCCGCAAAGAACTTAAGCGTAGTTAGTAACTTTAGGGTTGTTAATACTGCTTCAGGAGACGTAACTGAATTTGTTGGACCGGATGTTAAACTTGCTTGGGATAAGATTCCAGAGGAAGAAATAATTCCTGAAATTTACTATACTTTGGAAATTTTTGATTCTCAAGATAGAATGCTTCGTAGTGTTAGAATAGAAGATGTCTATACCTATGATTATCTATTAACATATAATAAGGCGGATTTTGCTTTACTAAACTCGGGGGCTCTAGGTATCAATCGTAAATTACGGTTTAGAATACGAGCTGAAGGGGAAAACGGAGAGCAATCTGTTGGTTGGGCTACTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
77ad38a47b2da9d7e84062fc973c1d37930a27f9629ee231a9054e713e0602de
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8353
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Nucleotide sequence of bacteriophage T5 DNA region including gene D17 Endrich,C. and Heller,K.J. 2021 — GenBank