Protein

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Genbank accession
YP_010673451.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,75
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MGAGGFRKNTGRNNTTLPYNVGFLNNVQDTETYNVAVYDELQKVSTATNQMFQAIDEIHEEIDVRIKALHAMNLQFDELENRITTEIETAIADIQTQMGNLSTEDIWDKSVQPPVKLESTVSGFKTSIEGNTTKIQTVEGIVNDQGQEIAIIQSDLTNGTGSVSQYMKLTEYEATWGINSTVNGKYAGVKLTNNGTNSQFQVTANKFIVGDGSSGNTPFVFENGRAMMEFADIKNVNITTAQIANARIQWAQIDNVSISNAQIQNLSADKITAGSMWGSNWRLTVGGDFVMGGTGGAQLWMNGNRIDFYDGSGALRIRIGSW
Physico‐chemical
properties
protein length:322 AA
molecular weight: 35224,73850 Da
isoelectric point:4,67179
aromaticity:0,08075
hydropathy:-0,35311

Domains

Domains [InterPro]
DC_0177
ATT
1–159
DC_0177 IPR015406 IPR015406
DC_2243
RBD
289–322
DC_2243
YP_010673451.1
1 322
Architecture
ATT
RBD
ATT 1-159 | RBD 161-322
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010673451.1
1 322
Domain Start End Length (AA) Confidence
N-terminal 1 263 263 0,9923
Central domain 264 311 49 0,1064
C-terminal 312 322 10 0,9774
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-263
Central
264-311
C-terminal
312-322

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage O18-011
[NCBI] 		2742113 Uroviricota > Caudoviricetes > Mktvariviridae > Kuravirus > Kuravirus O18011
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010673451.1 [NCBI]
Genbank nucleotide accession
NC_070985.1 [NCBI]
CDS location
range 22670 -> 23638
strand -
CDS
ATGGGTGCAGGTGGTTTTCGTAAGAACACTGGTCGCAATAACACCACACTCCCGTACAACGTTGGGTTTCTCAATAATGTACAGGACACAGAAACTTATAACGTAGCCGTTTATGATGAACTACAGAAAGTCAGCACAGCTACTAACCAAATGTTCCAAGCTATAGATGAAATTCACGAAGAGATTGATGTTCGTATCAAAGCTCTTCATGCGATGAATCTACAATTTGATGAGCTTGAGAATAGAATTACTACAGAGATAGAAACAGCTATTGCAGACATTCAAACACAGATGGGAAACCTCTCCACTGAAGATATTTGGGATAAATCTGTTCAACCTCCTGTAAAATTAGAAAGCACTGTATCTGGCTTTAAAACAAGTATTGAAGGTAACACAACTAAGATTCAAACGGTAGAAGGGATTGTTAATGATCAAGGTCAAGAGATTGCTATTATTCAATCCGACCTGACGAATGGAACAGGAAGTGTCTCTCAGTATATGAAGCTCACCGAGTACGAAGCTACGTGGGGCATTAACTCTACAGTAAATGGAAAATACGCTGGAGTCAAATTAACTAACAACGGAACAAACAGTCAATTCCAAGTAACAGCCAATAAGTTTATTGTTGGTGATGGTAGCTCTGGTAACACTCCTTTTGTGTTTGAGAATGGCAGAGCTATGATGGAATTCGCTGACATAAAGAATGTTAATATCACAACTGCTCAGATTGCTAATGCTAGAATCCAATGGGCACAGATTGATAACGTATCCATTTCGAATGCTCAGATTCAGAACTTGTCCGCTGATAAAATCACTGCTGGTTCTATGTGGGGTTCTAACTGGAGACTTACTGTTGGTGGTGATTTTGTTATGGGTGGTACAGGTGGGGCACAATTATGGATGAATGGAAACAGAATAGACTTCTACGATGGAAGTGGTGCTCTAAGAATTAGAATAGGGAGTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d0d553d7b392f5620b9c839a8754ca3f31503777d469dc1e4301bd4920bf51d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6734
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and proteomic analysis of O18-011, a novel Escherichia coli phage Shahin,K., Bao,H., Soleimani-Delfan,A. and Wang,R. 2020-05-06 — GenBank