Protein

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Genbank accession
QXN60112.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MALIYFVSQSGDIIALDGTESVEVSKDNSVSKSSMMDGTTISDGYSEGNKVISISGKVTYSKSLRQQLDGTPTPLQFQRLIQQTERNHERFTLRTYKGSWPLLDDIKDCVIASNSVSITEYLDTIDVTLTIEQVFVSKSARTTYLAPQRTKQEGTSASVADTEDSTGGKGATEEKDNRTIALALAEDGTSYVNKILGL
Physico‐chemical
properties
protein length:198 AA
molecular weight: 21564,75070 Da
isoelectric point:4,79576
aromaticity:0,06061
hydropathy:-0,38131

Domains

Domains [InterPro]
DC_0628
STR
1–195
DC_0628
IPR048494
ATT
17–143
IPR048494
QXN60112.1
1 198
Architecture
STR
ATT
STR
STR 1-16 | ATT 17-143 | STR 144-195 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage HNL01
[NCBI] 		2853169 No lineage information
Host Aliivibrio fischeri ES114
[NCBI] 		312309 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Aliivibrio > Aliivibrio fischeri

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXN60112.1 [NCBI]
Genbank nucleotide accession
MZ456352 [NCBI]
CDS location
range 31091 -> 31687
strand -
CDS
ATGGCACTCATTTATTTTGTTAGTCAATCTGGTGATATCATTGCACTAGATGGTACTGAGTCTGTTGAAGTTTCTAAAGACAATTCAGTATCAAAATCTTCAATGATGGATGGTACTACTATTTCAGATGGTTATTCTGAAGGTAATAAAGTTATCAGTATTTCTGGTAAAGTTACTTATTCTAAAAGTTTACGTCAACAATTAGACGGAACACCAACCCCTTTACAGTTTCAAAGACTGATCCAACAAACAGAAAGAAACCACGAACGATTTACTTTACGTACTTACAAAGGTTCATGGCCTCTCCTTGATGATATTAAAGATTGTGTGATTGCTTCTAACAGTGTAAGTATTACAGAGTACTTAGATACTATAGATGTTACTCTGACGATCGAGCAAGTGTTTGTATCTAAATCCGCAAGAACAACCTACTTAGCACCACAGAGAACTAAACAAGAAGGTACTTCAGCTTCTGTTGCAGATACTGAAGATTCTACAGGTGGTAAAGGTGCAACTGAAGAGAAAGATAATAGAACTATTGCATTAGCTTTGGCAGAAGATGGTACATCTTACGTGAATAAGATTTTAGGGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d4124f390de380ad095cc8dda46fae4440fae7e6c666f5c2f15789d8edf95f27
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7730
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Independent host- and bacterium-based determinants protect a model symbiosis from phage predation Lynch,J.B., Bennett,B.D., Merrill,B.D., Ruby,E.G. and Hryckowian,A.J. — — GenBank