Protein

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Genbank accession
YP_007672922.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MPLRNVPITYTLDQQRQEINALAADVNGLDVTFDEKVDDRVAALLQGGVGTAVTYDDANGSLTIDLAFNEFSTSSVLEGTNLYYTDTRANAAIDARVTQTFVNNLNITNLGPQDSITLSLGQTTKYLTPLNYNNVSWDTAYAWGDHDAVGYLTSYTETSTLNDVVGRGDTTASSINVGGVNTNSITTATASANLTLTGNNIVIPSNTRFGTIATALANDYGVLVDKDGEIVINHAPGSGGLTLKSSGNTTFNIDGTGKINGVVKFVTSDGSAGQSLTTDGNGQLYWGEGGGANVEVGDNPPSNATSGDMWWESDSGRLKVYYDNGANPAAWVDASPPLVADAPAAAFRTAVGDVDASFTLGGSGTVFADDNGTFNAGITVTTFSRVRISILFGKLNGTNNTSGLIALERSDGSSLTEICTVATTDPNVTGVTPLYFEFVDSHGGTTGDIMTYQIRLKSLTASGSRSGTETCQLYVQEI
Physico‐chemical
properties
protein length:478 AA
molecular weight: 49974,05100 Da
isoelectric point:4,18008
aromaticity:0,07741
hydropathy:-0,15167

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM1
[NCBI] 		754037 Uroviricota > Caudoviricetes > Pantevenvirales > Anaposvirus > Anaposvirus socalone
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007672922.1 [NCBI]
Genbank nucleotide accession
NC_020837 [NCBI]
CDS location
range 4588 -> 6024
strand -
CDS
ATGCCATTAAGAAACGTACCAATTACATATACCCTTGACCAGCAGCGACAGGAGATCAATGCTCTTGCTGCTGATGTAAACGGGTTAGACGTTACCTTTGACGAGAAGGTAGATGATAGGGTTGCTGCCCTATTACAAGGTGGCGTGGGAACAGCGGTTACTTATGATGATGCTAATGGATCCCTAACAATTGATCTAGCATTCAATGAGTTTTCCACATCTTCAGTTCTTGAAGGAACGAATCTTTATTACACAGACACTAGAGCGAATGCCGCTATTGACGCGAGAGTAACACAGACATTTGTCAATAACCTGAACATTACTAATCTTGGTCCCCAAGATTCTATTACTCTATCTCTAGGTCAAACAACCAAGTATCTGACTCCTCTAAACTACAACAATGTATCTTGGGACACCGCGTATGCATGGGGTGATCACGATGCTGTTGGATATCTAACAAGTTACACAGAGACTTCCACACTTAATGATGTGGTTGGACGAGGAGATACAACTGCTTCTAGTATTAATGTTGGTGGAGTAAATACAAATTCGATTACTACAGCAACAGCATCAGCAAACTTAACGTTAACTGGAAACAATATAGTTATTCCATCTAATACTAGGTTTGGTACGATTGCTACTGCACTGGCAAATGACTACGGTGTGCTTGTTGATAAAGATGGTGAAATTGTAATCAACCACGCACCAGGTTCTGGTGGTTTAACACTGAAGTCTAGTGGTAACACCACATTCAATATTGACGGTACTGGAAAAATTAATGGTGTCGTCAAGTTCGTAACTTCTGATGGCAGTGCTGGTCAATCTCTGACCACTGATGGAAATGGTCAACTGTATTGGGGCGAAGGTGGTGGTGCCAATGTCGAAGTAGGTGACAATCCACCATCAAATGCCACTAGTGGAGATATGTGGTGGGAAAGTGATTCTGGTCGCTTAAAAGTTTATTACGACAATGGAGCAAACCCAGCAGCATGGGTCGATGCATCTCCTCCTCTCGTAGCAGATGCCCCAGCTGCAGCATTCAGAACCGCTGTTGGTGATGTTGATGCATCATTTACTTTGGGTGGTTCTGGAACTGTGTTCGCTGATGATAATGGAACATTCAATGCAGGTATTACTGTAACAACCTTTTCCAGAGTTAGAATTAGCATTCTGTTTGGTAAACTAAATGGTACTAACAATACCAGTGGACTTATTGCTCTCGAAAGAAGTGATGGATCCTCACTGACAGAAATCTGTACAGTCGCTACAACAGATCCAAATGTCACTGGTGTGACTCCATTGTATTTTGAGTTTGTTGATAGTCATGGAGGAACTACTGGCGATATCATGACATATCAAATTAGATTGAAGTCTTTGACTGCATCTGGAAGTAGATCTGGCACTGAAACATGTCAGTTATATGTTCAAGAAATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c4508afae3d57a6849194e5243c41b9a1ca9f484476cbe5e456a6ff4a575251
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6185
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-CAM1 0208SB26 Henn,M.R., Martiny,J., Weihe,C., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank