Protein

View in Explore
Genbank accession
QHR65026.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MAAMTPQQSVRAVYKAEQEINSTENKNTSASTVKGDNGFCILASVYNSSSDQYIQNFKAITFDSVPEIGVTREADVTSFPVESGSDVSDHVQIKNNRFKLSGIITETPIRLMRDQLYSAGVNGARISQAIEYLDQIFESRQPIVLLTEHRTFENVILKGYSYDYKSEFAMQFDLEFEQIRLVSKATTNAIAVKTAPNKSTGGDVKGQVASNGPKSDITVRTAEATNTPTNNGG
Physico‐chemical
properties
protein length:233 AA
molecular weight: 25525,11030 Da
isoelectric point:5,32544
aromaticity:0,07725
hydropathy:-0,41588

Domains

Domains [InterPro]
DC_0628
STR
42–233
DC_0628
IPR048494
ATT
62–188
IPR048494
QHR65026.1
1 233
Architecture
STR
ATT
STR
STR 42-61 | ATT 62-188 | STR 189-233
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHR65026.1
1 233
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,8813
Central domain 18 216 200 0,0548
C-terminal 217 233 16 0,9831
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-216
C-terminal
217-233

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ukendt
[NCBI] 		2696458 Uroviricota > Caudoviricetes > Stephanstirmvirinae > Phapecoctavirus ukendt >
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR65026.1 [NCBI]
Genbank nucleotide accession
MN850565.1 [NCBI]
CDS location
range 111481 -> 112182
strand +
CDS
ATGGCAGCAATGACTCCACAACAGTCGGTGAGAGCCGTCTATAAGGCAGAACAGGAAATCAACTCTACCGAGAATAAAAATACCTCGGCATCTACTGTAAAGGGTGATAATGGTTTCTGCATTTTAGCAAGTGTTTATAATAGTTCAAGTGATCAATACATTCAAAACTTTAAAGCAATTACTTTCGATTCAGTCCCTGAAATAGGTGTAACTCGTGAGGCAGATGTTACAAGTTTTCCAGTAGAATCAGGATCGGATGTAAGTGACCACGTTCAAATAAAAAACAACAGATTTAAACTTTCAGGTATAATTACCGAAACACCAATTCGGCTTATGCGAGATCAATTATACAGTGCAGGTGTAAATGGTGCAAGGATTTCTCAAGCAATAGAATATCTAGATCAAATATTTGAGTCAAGACAACCAATAGTTCTTTTGACAGAACACAGAACTTTTGAAAATGTTATTCTCAAAGGTTATTCGTATGATTATAAATCTGAATTTGCTATGCAATTTGATTTAGAGTTTGAACAAATCCGTCTCGTTTCTAAGGCCACTACTAATGCTATTGCTGTAAAAACAGCACCAAATAAATCGACGGGTGGTGATGTGAAAGGTCAAGTTGCTTCGAATGGTCCTAAGTCAGATATTACAGTAAGAACGGCTGAAGCTACTAATACCCCAACAAACAACGGAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f34da0d553f744fd0447b55d5b45971138c57f86b4b44282dafde763c77132bc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7118
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank