Protein

Genbank accession
YP_007877502.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,77
TF
Evidence Phold
Probability 1,00
Protein sequence
MHPLQNGSQDTNRPPKKPLTGSPGWFTESGDNNVPSYPGADWFNHVIAEFQNMLASQGIAFNPDSDDHLSKAFLGAFANKETVFLSTEDMVTGTNFNGKSVTHEIGNIYKTFNNGTFNHWKVTAETANGFTKVALGQSLTASMLRTNGENLAHPPQQATTYAEPISRFVYGLEYTFAITKGFSSKSRTLKFIHSGDSTTAGDAAEGFPPAVVMANYGEDYGLYQTQLNRGHSGQDTVRWNQQYVSEDIDDHGDMDCYIVRWGINDGSSHGDPEIFEAALRQGLQKLRNHRSYDELTIVLMSPNSTYDTPNGRDSQWYESISLSIKNAARDFQCVYFDTYGLFRDSYHGAGVYMDDPFGDGRGIHPKKEFNTAIYSYLANLLFSLPAGLRANSNRVSNIPSFMNMPNFNTPLENYHHGISIYRATLDEGWPLDGSVTTERTADNVYYQRLVEYQSGSPRRIYTRIGAGVDSSVSPWRKFGLISLDYATDWGELSDFEPLRLHMSGQLVTLTGGATWTGSGEPGANAKVSLIPADLRPANNVQFIAKTQRGLTFYHTMVSISPNGDVIVQSPESGELVFFSMSWNPADTI
Physico‐chemical
properties
protein length:588 AA
molecular weight: 65164,29240 Da
isoelectric point:5,31504
aromaticity:0,11735
hydropathy:-0,47840

Domains

Domains [InterPro]
IPR036514
177–381
IPR036514
SSF52266
187–382
SSF52266
cd00229
195–384
cd00229
IPR013830
195–367
IPR013830
YP_007877502.1
1 588
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage martha 12B12
[NCBI] 		573175 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007877502.1 [NCBI]
Genbank nucleotide accession
NC_021070.1 [NCBI]
CDS location
range 91 -> 1857
strand -
CDS
ATGCATCCTTTACAAAATGGCAGTCAAGATACGAACCGCCCTCCTAAGAAGCCTCTTACGGGTTCACCTGGTTGGTTTACTGAATCTGGTGATAACAACGTCCCTAGCTATCCTGGTGCCGATTGGTTTAATCATGTGATAGCTGAGTTTCAGAATATGCTAGCTTCGCAGGGGATAGCGTTTAACCCAGATAGTGATGACCATCTTTCAAAAGCCTTTTTAGGAGCGTTTGCTAATAAAGAAACCGTTTTTTTGTCAACTGAAGACATGGTGACGGGAACAAACTTTAATGGTAAATCTGTCACGCATGAAATTGGTAATATATATAAAACATTTAACAATGGAACTTTTAACCATTGGAAAGTTACAGCGGAAACAGCTAATGGTTTTACCAAGGTTGCTTTGGGTCAATCACTAACTGCGTCAATGTTACGTACTAACGGTGAAAATTTAGCACATCCACCTCAGCAAGCCACAACGTATGCAGAACCGATTAGTCGATTTGTATATGGTTTAGAATACACATTTGCGATTACAAAAGGCTTTTCCTCTAAAAGTAGAACTCTGAAATTTATACACTCAGGTGACAGCACTACCGCTGGAGATGCTGCTGAAGGGTTTCCCCCTGCCGTAGTCATGGCAAACTATGGAGAGGATTACGGTTTATATCAAACTCAGCTGAATCGAGGGCATAGTGGTCAAGATACAGTGCGCTGGAACCAACAATATGTTTCGGAAGATATTGATGACCACGGTGACATGGATTGCTATATCGTTCGTTGGGGTATAAATGATGGTTCTTCGCATGGTGACCCTGAGATTTTTGAAGCAGCACTTCGTCAAGGCTTGCAAAAATTACGAAATCATCGTTCATATGATGAACTAACCATCGTCTTAATGTCGCCGAACTCAACTTATGACACGCCTAACGGTAGAGATTCACAATGGTATGAATCCATTTCGCTCTCGATTAAAAATGCTGCGCGTGACTTTCAGTGTGTGTATTTTGATACTTATGGCCTGTTCAGAGATTCCTATCACGGAGCTGGAGTCTATATGGATGACCCTTTCGGAGATGGGAGAGGTATTCATCCAAAAAAAGAGTTTAATACGGCAATATACTCGTATTTAGCAAATCTACTATTTAGTTTGCCAGCTGGGTTGCGAGCAAACTCTAATAGGGTTTCTAATATTCCGTCATTTATGAATATGCCTAACTTCAATACTCCTTTAGAAAACTATCACCACGGTATAAGTATTTATCGAGCAACGTTGGATGAAGGATGGCCTCTTGATGGTTCAGTCACAACAGAAAGAACTGCGGATAATGTCTATTATCAACGGCTTGTGGAGTATCAAAGTGGATCACCAAGGCGTATATATACACGGATTGGTGCGGGCGTGGACAGCTCCGTTTCTCCGTGGAGAAAGTTTGGCCTTATTTCACTAGATTACGCTACCGATTGGGGGGAGCTTTCTGACTTCGAGCCTTTGAGACTTCACATGTCAGGTCAGCTAGTTACCCTAACCGGTGGAGCAACGTGGACAGGAAGTGGCGAGCCTGGTGCAAATGCAAAAGTATCTCTGATTCCAGCCGACCTACGTCCCGCAAATAATGTTCAATTTATAGCAAAGACTCAGCGTGGACTTACTTTTTATCATACTATGGTATCTATATCTCCTAACGGGGACGTCATTGTGCAATCCCCAGAAAGCGGCGAATTAGTTTTCTTTTCCATGAGCTGGAACCCAGCCGATACGATCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
044ef55384d09458ad18302c5ad34a549dab853b106352faf6cfe5888a2a195a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7177
Evidence 0,7177
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage martha 12B12 Henn,M.R., Polz,M., Kauffman,A.K.M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank