Protein

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Genbank accession

AXF40830.1 [GenBank]

Protein name

tail fibers protein

RBP type

Evidence GenBank

Probability 1,00

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,86

Evidence RBPdetect2

Probability 0,57

Protein sequence

MANTTLTQFPAGQTQYKITFDYLARPFVVVTLVNSNDAALNRVLTAGNDYLFLNPTTIEILTSQAGFDILQIHRFTSTDLLVDFRDGSVLTATDLTNSELQAIHIAEEGRDQSTGLAKQYADQAVEAGKDAQDILNQIILLGKNGYTPVGSFENGGTVRLQNDVLQYGSGTATTHWRWEGTLPKVVPAGSTPTSAGGIGTGKWIDVTDATLRGQLAGTGGASMVKASDGRTVEQWLVQSDSASYRAKNMAKLAWVDYQVHNRGSIKSCFLGDSMTAGFDRTSSDVIPPQDGDWATRASMNYPYRFASYLAEQSGCTSTVVMRAISGHTAKQAYEQAEWQTNPNCDIVFIMYAINDSGGVAGATLDIYMEYMEKLIRRYIEWGCAVVVQRPSGGGQGAGKPSWLHWAKRLQMVARVYGCPIFDAHEVMFYRHFAAVQSDGLHYNSMGYAIHGEKLASMLMAGGLLDTYRPVVNEITVWTGMMSDRVGWCDAMGNIGAFRSDGAFTRTKVTGQLPGSTRVVTTFSFYLDAEAAHIYGKFVGKMNVIMTNSRWWNNNAQPYYQYADDQPHSFGMSLERTPKSPNDFSGASGSRKFIGRVIGRGWHTLTFFKALDGTDASESFINSLTIQPIPLGLSTEQMWGQDEERRYKVVHTRKLPSPSGQGNNLPQATALNSFHMRVPQSVLGTGPGALCLPTPYFYNTIPATLRITDEKGTYIEFLVYKNGSSGLTWTGKVLKSTLAEASYPTLTAQLSTAVQSLVRAAGQDGTNMPLENIYDFNGGLQPQNGSASDTSWKGGIYFLFTLTWPGAAPTGYWNIELEGSDWFGNSEPSFGAY

Physico‐chemical properties

protein length:	832 AA
molecular weight:	90996,12670 Da
isoelectric point:	5,96124
aromaticity:	0,10938
hydropathy:	-0,25541

Domains

Domains [InterPro]

IPR005604
ATT
12–115

IPR005604 G3DSA:2.10.10.80 IPR036514

DC_0018
ATT
36–349

DC_0018 DC_0640

IPR040775
RBD
150–208

IPR040775 cd00229

SSF52266
STR
269–458

SSF52266

IPR013830
ENZ
269–449

IPR013830

AXF40830.1

1 832

Architecture

ATT

STR

RBD

ATT 12-349 | STR 350-459 | RBD 460-829 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	12	115	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits
DC_0018	ATT	DC_0018	36	349	Novel HMM	DC_0018	N-terminal	Low	Positional only	154 proteins / 154 hits
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	146	217	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits
IPR040775	RBD	DC_0821	150	208	InterPro cluster	Tail spike TSP1/Gp66, N-terminal domain	Central	High	Text match	1281 proteins / 1285 hits
IPR036514	STR	IPR036514	246	459	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits
cd00229	ENZ	DC_0001	269	456	InterPro cluster	cd00229	C-terminal	High	Text match	480 proteins / 783 hits
SSF52266	STR	SSF52266	269	458	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits
IPR013830	ENZ	DC_0001	269	449	InterPro cluster	SGNH hydrolase-type esterase domain	C-terminal	High	Text match	480 proteins / 783 hits
DC_0640	RBD	DC_0640	455	829	Novel HMM	DC_0640	C-terminal	Low	Positional only	15 proteins / 15 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

AXF40830.1

1 832

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	242	242	0,9962
Central domain	243	493	252	0,5922
C-terminal	494	832	338	0,5532

Note: Constraints were applied during segmentation.
Fixed 11 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-242

Central
243-493

C-terminal
494-832

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Shigella phage SFPH2 [NCBI]	2269380	Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Kayfunavirus
Host	Shigella flexneri [NCBI]	623	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

No CDS data available.

Genome Context

Tertiary structure

PDB ID

ece87990823d7b02dccb8b4aba0311543f9fd131f02c22aacc5bb94ba297ee9e

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6241

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence