Protein

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Genbank accession
YP_009833803.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MFFVFTGPDKTAVAEYLRGASGAGQVLDEAGTPVVHLTPKGMASYRVIPNMATLRTTKPKNPNEIVEVTEYYTGKMNGGGRFVSAVNTTVPDDGGYTTIRVDDNTVWYRQDLRALTLWDGGCDNSVADNGPFIQNIQYSRSLQPIKVPSQYFGIRTPIVIKANKGFALYADGAHTGRAVLQWMGGDFNDDTTAVLSITVDNPTDFTYSGVVLKGFSILGGGKVLHGLYMRNVGYPEIDSLKIENFKGAGLLLDQVQDGYFNFLEVQICGRTSGDYGVYADLVNLSKTQFAPIHIISSKSGDASNMLRFQGGQWEANNCSPTVYYRGGIGLWISKIHCEQRNGPMSKFKLYDPNFVMDTSPEKAGRVFIQVDGSSSSEVMLDQMQSSETERFVYAGGYGVVMITNTTRGGGICLASANREFAMTITNSWLTDCYFSSSSRVWIDNCRLGNLTWSYPSYTGLISNTMMKDVVMNNDGSFPDINFNNCIFDNFTNYVKNVRVTGGHCKGNFSFNASGGGGAVIGTVIDGTLSVDTKWGIDFRPSGAVMNQVYSNNAPAEQAPNGTRPNGSIWVNKNVVANAPDGTPISWVKDAAGKWVPFAFVGTLANGVVAKEYTFANLPGASLAKRAIVTCTDTAKTPKDQLIYSDGTNWRYVSDPATVVTKG
Physico‐chemical
properties
protein length:662 AA
molecular weight: 71867,08420 Da
isoelectric point:6,34843
aromaticity:0,10876
hydropathy:-0,19653

Domains

Domains [InterPro]
DC_1164
ATT
1–45
DC_1164 DC_1709
IPR059934
RBD
48–109
IPR059934
YP_009833803.1
1 662
Architecture
ATT
STR
ATT 1-45 | STR 46-627 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009833803.1
1 662
Domain Start End Length (AA) Confidence
N-terminal 1 128 128 0,9910
Central domain 129 546 419 0,9949
C-terminal 547 662 115 0,9867
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-128
Central
129-546
C-terminal
547-662

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaM_ 2050HW
[NCBI] 		2024252 Uroviricota > Caudoviricetes > Chimalliviridae > Moabitevirus mv2050HW >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009833803.1 [NCBI]
Genbank nucleotide accession
NC_048668.1 [NCBI]
CDS location
range 122550 -> 124538
strand +
CDS
GTGTTCTTCGTATTCACTGGGCCAGACAAAACTGCGGTAGCTGAGTACCTTCGTGGCGCCAGCGGTGCAGGGCAGGTGTTGGATGAGGCAGGGACTCCTGTAGTCCACCTGACTCCAAAAGGTATGGCATCTTATCGTGTCATTCCTAACATGGCTACACTGCGTACCACTAAGCCAAAGAACCCTAACGAAATTGTTGAGGTCACCGAGTATTACACCGGTAAAATGAATGGCGGTGGTCGCTTTGTATCTGCGGTTAATACGACCGTACCTGACGACGGTGGTTACACTACGATTCGCGTTGATGATAATACCGTGTGGTATCGCCAGGATCTACGTGCTTTGACTCTGTGGGATGGTGGTTGCGATAACTCGGTAGCGGATAACGGCCCGTTCATCCAGAACATCCAATACTCTCGTTCTTTGCAACCGATCAAGGTGCCGAGTCAGTACTTCGGTATCCGTACGCCAATCGTAATCAAAGCTAACAAAGGGTTTGCTTTGTACGCAGATGGTGCCCATACTGGTCGTGCTGTACTGCAATGGATGGGTGGTGACTTTAATGACGATACCACTGCAGTTCTGAGCATTACTGTAGACAATCCTACTGACTTCACTTACTCGGGTGTAGTTCTGAAGGGATTCTCTATCTTGGGTGGCGGTAAAGTCCTACACGGCCTCTACATGCGTAACGTAGGTTACCCTGAGATCGATAGCCTTAAGATCGAGAACTTCAAAGGGGCCGGTCTTCTGCTCGACCAAGTTCAGGACGGTTACTTCAACTTCCTGGAAGTTCAAATCTGTGGTCGTACCTCAGGGGACTACGGCGTTTACGCTGACTTGGTCAACTTGAGCAAGACGCAATTCGCACCGATCCACATCATCTCCAGTAAGTCAGGCGATGCATCTAACATGCTGCGTTTCCAAGGCGGTCAGTGGGAAGCTAACAACTGTTCCCCTACTGTCTACTATCGTGGTGGTATTGGCCTGTGGATCTCCAAGATTCACTGCGAGCAGCGTAACGGCCCGATGAGTAAGTTTAAACTCTACGATCCTAACTTTGTCATGGACACCAGTCCTGAGAAAGCGGGTCGTGTGTTTATCCAAGTAGATGGCTCCAGTTCGTCCGAAGTCATGCTGGATCAGATGCAGTCTTCTGAAACCGAACGTTTCGTTTACGCCGGTGGTTACGGTGTGGTCATGATCACGAACACAACGCGAGGGGGCGGTATTTGTTTAGCCTCTGCCAACCGTGAGTTTGCCATGACTATCACCAATAGCTGGTTGACCGACTGCTACTTTAGCTCGTCTTCTCGGGTATGGATCGACAACTGCCGTCTTGGTAACCTGACCTGGTCTTACCCGTCTTATACTGGACTGATTTCCAACACCATGATGAAAGACGTCGTCATGAACAACGATGGCTCTTTCCCGGATATCAACTTCAACAACTGTATCTTCGATAACTTCACTAACTACGTGAAGAACGTTCGTGTTACCGGCGGACACTGTAAAGGTAACTTCTCCTTCAACGCCTCTGGCGGTGGCGGCGCAGTAATCGGTACAGTTATTGATGGTACGTTGAGCGTTGATACCAAATGGGGTATTGACTTCCGTCCATCTGGCGCAGTGATGAACCAGGTTTACTCAAATAACGCCCCTGCGGAACAAGCGCCTAACGGCACTCGTCCAAACGGTTCTATCTGGGTTAACAAGAACGTGGTTGCCAACGCACCTGACGGCACTCCTATCTCTTGGGTTAAAGATGCCGCCGGTAAATGGGTTCCGTTTGCATTCGTTGGTACCTTAGCTAACGGCGTGGTGGCGAAAGAATATACGTTCGCTAACTTACCAGGGGCATCTTTGGCTAAGCGTGCGATTGTTACCTGTACGGATACAGCGAAAACGCCTAAAGACCAACTGATCTATTCCGATGGGACTAACTGGCGTTACGTGTCCGATCCTGCCACTGTAGTAACTAAAGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8f25d83450a1ec801f4fa486d2492fbb93548f92e19f1b315d38ceaee3d3ef69
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7671
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50