Protein

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UniProt accession
A0A8S5RM58 [UniProt]
Protein name
Pectate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGINPIHKAPYTNFHDLNLDWIIEVLNEFNTKLTNFVSLATIKYADPIQWDITRQYEANTVVVDSHGNAYLSVKPVPSGVSLDRVEFWTKIGNFDELWANVKKAITPIDEGHSHTATAARAVNDLVWVNGALVRVTKAMIAGDSYVPGSNCVSSSTNEVLHYLVNAFTDGLNAEQKARETADTQLQTAIKENKTAIDNEQTTRENADTQLQTAIENEQTARENADTQLQTAIKDEQTARENADTQLQNSINQMPIYISAPLAGIKANDQSAAAQNTSKLQQLLDAGQTVYFPSGTYYMSAALYMKRGCGIIGENMRDTAIIWITASNGIIYDLEYKAPHTYDNIYFTIRIESLALYGVGATNGAGSGIYIRNKTWMDTAKQNHDEYRKIKGDSYALECRNSAIRDIIVSGWSIGINSSLYIAYVSIINAFVDTCDLGIDAKFSDSVLCNIVVTFCYNGILCETEANKWCNLAIKMNGWRASYDASHTITGSIALHLYNAKRELFCNTEVQESYANGVVVEKASNNIVFSGLLLDANGFKVPVGTEAYNIGIQILEGCYNIRGTILATNKNDVKCQRVGIYVAPDCGNIDLQYAEYEQQISAWTLGQNTCRSITTAKINNITKIAAPNFTNGADASYASFDGRNLHIAIHGYFIAAAPTDTSFSVAAAFGDIPFAQLPGNVYRDIYLYNSTDNALVHACYDNTTASVVIKAPVQPGKQINCEITFDML
Physico‐chemical
properties
protein length:727 AA
molecular weight: 79933,77920 Da
isoelectric point:5,05795
aromaticity:0,09354
hydropathy:-0,16726

Domains

Domains [InterPro]
DC_0292
STR
90–320
DC_0292
Coil
Unmapped
196–252
Coil IPR012334
IPR024535
ENZ
266–459
IPR024535
IPR011050
STR
275–456
IPR011050
A0A8S5RM58
1 727
Architecture
STR
STR 90-713 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5RM58
1 727
Domain Start End Length (AA) Confidence
N-terminal 1 271 271 0,9934
Central domain 272 615 345 0,9887
C-terminal 616 727 111 0,9868
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-271
Central
272-615
C-terminal
616-727

Taxonomy

  Name Taxonomy ID Lineage
Phage virus sp. ctxAI8
[NCBI] 		2825829 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE32149.1 [NCBI]
Genbank nucleotide accession
BK059117 [NCBI]
CDS location
range 11091 -> 13274
strand +
CDS
ATGGGTATCAATCCTATTCACAAAGCCCCCTACACCAATTTCCATGATCTCAATCTTGATTGGATTATTGAGGTACTGAACGAATTTAACACCAAACTGACGAATTTCGTCAGCCTGGCCACGATCAAGTACGCGGACCCCATCCAGTGGGACATTACCCGCCAGTATGAGGCGAACACCGTTGTAGTGGACAGCCACGGCAACGCGTATCTTTCCGTAAAGCCGGTGCCGTCCGGTGTGTCTCTTGATCGTGTGGAGTTCTGGACAAAAATCGGCAATTTCGATGAGCTTTGGGCCAATGTAAAAAAGGCCATTACTCCCATCGATGAGGGCCACAGCCACACCGCCACAGCTGCAAGAGCTGTCAACGATCTTGTATGGGTCAATGGGGCGCTGGTGCGCGTCACAAAAGCAATGATTGCCGGTGATAGCTACGTACCAGGCTCTAACTGCGTGAGCAGCTCCACAAATGAAGTTTTACACTACCTCGTCAATGCGTTTACTGATGGCCTGAACGCAGAGCAAAAGGCCAGAGAGACCGCCGACACGCAGCTCCAGACGGCTATTAAAGAAAATAAAACGGCCATTGACAACGAGCAAACAACCAGAGAGAATGCCGACACACAGCTGCAGACGGCCATTGAAAACGAGCAAACGGCCAGAGAGAACGCCGACACGCAGCTACAGACGGCCATTAAAGACGAGCAAACGGCCAGAGAAAACGCCGACACGCAGCTGCAAAATAGTATAAATCAAATGCCGATATATATCTCCGCCCCCCTAGCAGGTATTAAAGCTAATGACCAGAGTGCAGCAGCACAAAATACATCAAAGCTGCAGCAGCTGTTGGATGCCGGACAGACAGTATATTTTCCTAGCGGAACTTATTATATGTCGGCGGCCCTATATATGAAAAGAGGTTGCGGAATAATCGGCGAGAACATGCGCGACACGGCCATTATATGGATCACCGCCAGCAATGGAATTATTTATGACCTCGAATACAAGGCCCCCCATACATACGATAACATTTATTTTACGATTCGTATCGAATCGCTGGCCCTTTATGGAGTAGGGGCCACCAACGGGGCAGGAAGTGGCATTTATATCCGTAACAAAACATGGATGGACACGGCAAAACAAAATCACGATGAATATCGTAAGATCAAGGGCGATTCCTATGCGCTGGAGTGTCGCAATAGTGCTATCAGGGACATTATCGTCTCCGGGTGGTCCATTGGCATCAATTCGAGCTTATATATTGCATATGTATCCATTATCAACGCTTTTGTGGATACCTGCGATTTGGGAATCGACGCAAAATTTTCTGATTCGGTATTATGTAATATTGTAGTAACTTTTTGCTATAATGGCATTTTGTGCGAAACCGAGGCGAACAAATGGTGTAACCTGGCGATTAAGATGAACGGTTGGCGCGCCTCTTATGATGCTTCACACACCATTACGGGATCAATAGCCCTACATTTGTATAACGCAAAACGCGAACTATTTTGCAACACCGAGGTACAGGAGAGCTACGCTAACGGGGTAGTCGTCGAAAAAGCAAGTAACAACATCGTTTTTTCCGGGCTACTGCTCGATGCAAATGGATTTAAGGTTCCTGTAGGAACCGAGGCATATAATATTGGCATCCAAATACTGGAGGGGTGCTACAATATCCGGGGTACGATCCTCGCTACAAACAAAAATGATGTAAAATGTCAGCGTGTCGGCATTTATGTGGCACCCGATTGCGGCAATATCGATCTCCAATATGCCGAATATGAACAGCAGATCAGTGCATGGACCCTTGGCCAAAACACTTGCCGCAGCATCACAACGGCAAAGATAAACAACATTACAAAGATTGCAGCACCCAACTTTACAAACGGGGCTGATGCAAGTTATGCATCTTTCGATGGCCGGAATTTGCATATTGCAATTCACGGCTATTTCATCGCTGCTGCCCCTACAGATACAAGTTTCTCTGTTGCGGCCGCGTTTGGTGATATACCTTTTGCACAACTCCCCGGTAACGTTTACAGAGATATTTATCTGTATAATTCCACCGACAATGCACTTGTACATGCATGCTATGATAATACTACTGCAAGTGTCGTCATTAAAGCCCCTGTACAACCCGGCAAACAGATCAACTGTGAAATCACATTTGATATGCTTTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0016829 lyase activity Molecular Function IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
d493353bfca163454a68d89ead82b11364df0121dd71d1d5fc7bda716be26381
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7017
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50