Protein

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Genbank accession
UAG58398.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,96
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MSRELMPKSGIMMPHVVVTRDAAVVGVSTVDGQAGAINLTGKYLQKTDAAATYQTKTEGASKDFVLDSIQPIMSGALFREDPWVVNDTPFRSTGANGVESVDMMKVTTDNSIKIGSYASSVQGVEIHSAGRLQVVDQNDSGVETKYPVYSKRYRPEIEDLPFAAIGSYVKDSKGRTVGVTRTGINSDIKQLTQKVTFTQPVTVPDAVGDYDAVTLRQLRNSGGGSGGPTMSGISNFGIGDFHLRDSRAFIPAFEVFSDGQLLNRADYPDLWAYAQLLSPIEDSLWLEDPYQRGRYSKGDGTTTFRVPDRNGIQPNSLQALYGRGDGGASAANGQVFDSAAPDIVGAVAAYSAGTYAQLFGVATNAFSSSNAFFPDGTGDTIPPGSGPVDGRYNTVEFKASKYNGIYGRSNTEIMGRNFVGVWTIRANGGFVAANTSWSVINSDSAAPALNTSVVGGKVESKYTNPTSSQYARIYVSSSWGSVCSAVIEAQGASIHAYKFYEDGTVDFRQSGKTNPFRMYTPTGTWTGLTDAGPNNLTTNGMDRVAISSGSDTVVRGYSIGGSKPNGYPTKVGYHMYLPGSDAFGVACTTIGGDNGKFCRYFYDIDGQMYGSTDYGNFSYTKSGVSDENLKHNIVDIDAERAIEVIKGLKFKSFVYNDDEKNRSRRGIIAQQAETVEPLYVKTRKYPGMEKGSPEIEQKELDTTPMLLDTMQVVQDLLKRIEVLESKLAEK
Physico‐chemical
properties
protein length:730 AA
molecular weight: 78773,78460 Da
isoelectric point:5,46668
aromaticity:0,09726
hydropathy:-0,37315

Domains

Domains [InterPro]
DC_1514
STR
20–336
DC_1514 DC_1985
IPR030392
CHP
625–727
IPR030392
IPR030392
CHP
625–677
IPR030392
UAG58398.1
1 730
Architecture
STR
RBD
STR 20-336 | RBD 423-730
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UAG58398.1
1 730
Domain Start End Length (AA) Confidence
N-terminal 1 125 125 0,5712
Central domain 126 324 200 0,2078
C-terminal 325 730 405 0,8914
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-125
Central
126-324
C-terminal
325-730

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage FS2B
[NCBI] 		2830470 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UAG58398.1 [NCBI]
Genbank nucleotide accession
MW929182.1 [NCBI]
CDS location
range 936 -> 3128
strand +
CDS
ATGTCTAGAGAATTAATGCCCAAATCTGGTATAATGATGCCTCATGTGGTTGTAACCAGAGACGCGGCTGTTGTTGGGGTTTCTACTGTAGATGGACAGGCTGGAGCTATTAACCTCACCGGAAAATATTTACAGAAAACCGACGCAGCTGCTACCTATCAAACTAAAACAGAGGGTGCATCTAAAGATTTTGTGCTGGATTCGATTCAACCTATTATGTCTGGTGCGCTGTTCCGAGAAGACCCTTGGGTTGTTAATGATACCCCATTCCGTTCTACTGGAGCTAATGGTGTAGAATCAGTTGATATGATGAAAGTTACTACTGATAACTCAATCAAGATTGGTAGTTATGCCTCTTCAGTTCAAGGTGTAGAGATTCATTCTGCTGGTCGTCTTCAGGTTGTTGACCAGAATGACTCTGGGGTAGAAACTAAGTATCCAGTTTATTCTAAACGTTACCGTCCTGAGATTGAGGATTTGCCTTTTGCTGCAATTGGTTCTTATGTTAAAGACTCTAAAGGTCGTACGGTAGGTGTTACTCGTACAGGGATTAACTCTGATATCAAACAGCTCACACAGAAAGTTACTTTCACTCAACCAGTAACTGTCCCTGATGCAGTTGGTGATTATGATGCAGTCACTTTGAGACAGCTTCGAAACAGTGGTGGTGGCTCTGGTGGTCCTACGATGAGCGGTATCTCTAACTTTGGTATCGGTGATTTTCACTTACGGGATAGTCGAGCTTTCATCCCAGCTTTTGAAGTGTTTTCTGATGGTCAGCTTCTAAATCGTGCAGACTATCCAGACCTGTGGGCTTATGCACAGCTGTTATCTCCTATTGAAGACTCTTTGTGGCTAGAAGACCCTTATCAAAGAGGTAGATACTCTAAGGGTGATGGCACAACTACTTTCCGTGTTCCAGACCGAAATGGTATTCAGCCTAACTCCCTTCAGGCTCTTTATGGACGAGGTGATGGTGGTGCTTCCGCAGCTAATGGTCAAGTATTTGATTCTGCGGCCCCAGACATTGTCGGCGCTGTTGCAGCATACTCTGCTGGAACTTATGCCCAGCTTTTTGGAGTAGCTACCAATGCATTTTCATCTAGTAATGCCTTCTTTCCTGACGGTACAGGGGATACAATACCTCCGGGGTCTGGGCCAGTCGATGGTCGATATAACACTGTTGAGTTTAAGGCTTCCAAATATAATGGAATTTATGGTCGCAGTAACACAGAGATTATGGGTCGTAACTTTGTTGGTGTGTGGACTATTCGCGCTAATGGTGGGTTTGTCGCTGCTAACACTTCTTGGAGTGTCATTAATAGCGATAGCGCAGCTCCGGCTCTAAATACTTCTGTGGTTGGTGGTAAGGTAGAATCTAAATATACTAACCCAACCTCTTCCCAATATGCTCGTATTTATGTTTCCTCTTCTTGGGGAAGTGTTTGCTCTGCCGTGATTGAAGCACAAGGTGCAAGTATTCACGCTTATAAGTTTTATGAGGATGGCACTGTTGATTTTAGGCAGTCTGGTAAGACAAACCCATTCCGCATGTACACACCAACTGGAACTTGGACTGGACTGACGGATGCGGGGCCAAACAATTTAACCACCAATGGAATGGATAGGGTGGCGATTTCTAGTGGCTCTGACACAGTGGTGCGTGGGTACTCTATTGGAGGATCTAAACCTAATGGTTATCCAACCAAGGTTGGGTATCATATGTATTTGCCGGGAAGTGACGCCTTCGGTGTCGCCTGTACAACTATTGGAGGAGACAACGGAAAGTTCTGTCGATATTTTTACGACATAGACGGGCAGATGTATGGCTCAACTGATTATGGAAACTTTAGCTATACAAAGAGTGGTGTCTCGGATGAAAACCTGAAACATAACATTGTTGATATTGATGCAGAAAGAGCTATTGAAGTAATAAAAGGACTGAAGTTCAAATCCTTTGTTTACAACGATGATGAGAAGAATCGATCTCGTCGTGGTATCATTGCACAGCAGGCAGAGACGGTAGAACCTCTGTATGTCAAGACTCGCAAATACCCAGGAATGGAGAAAGGCTCTCCAGAAATTGAGCAGAAAGAGCTAGACACTACTCCAATGCTCCTTGACACTATGCAAGTAGTTCAAGACCTTCTGAAGCGTATTGAAGTTCTGGAATCGAAGTTAGCAGAGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
56d9f237b9e79247fed4f2807f859790bd539afddaadcba5dbf659a880860cf3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5944
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a newly isolated Podoviridae phage against E.coli causing urinary tract infections Malik,S., Nehra,K., Rana,J.S. and Mann,A. 2019-09-07 — GenBank